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Posts by dekim

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1) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6226)
Posted 15 days ago by Profile dekim
Sorry! I've canceled this test batch. Looks like a database issue I'll have to troubleshoot.
2) Message boards : RALPH@home bug list : Rosetta mini beta and/or android 3.61-3.83 (Message 6214)
Posted 46 days ago by Profile dekim
We are still actively using 3.73 for forward folding and for Robetta structure prediction.
3) Message boards : RALPH@home bug list : Rosetta mini beta and/or android 3.61-3.83 (Message 6212)
Posted 46 days ago by Profile dekim
The latest boinc client release, 7.8.2 is buggy. The BOINC developers are working on a fix but not knowing how long it may take, I will be testing application side fixes for the minirosetta app. The main issue is that work may run in dirty slot directories and when this happens our application crashes. It's causing a 10-20% increase in failures.
4) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6207)
Posted 80 days ago by Profile dekim
Aside from this issue, are the graphics ok?
5) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6203)
Posted 87 days ago by Profile dekim
Yes, I just updated the app to 4.02 to address this.

The issue was that we are using the new BOINC graphics api which uses a new to us font rendering framework. The BOINC ttfont.cpp code necessary for the fonts to work does not resolve the filename (using the boinc_resolve_filename api function) of the ttf font file so the graphics app would crash under the boinc client but not with a local test. This is because we passed the current run directory to the ttf_load_fonts function and not the project directory. Luckily it didn't take me that long to find the cause of this bug and hopefully I fixed it.
6) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6201)
Posted 88 days ago by Profile dekim
Sorry, I was busy during the weekend and only added a small batch just in case there were issues. I also noticed the assimilator and validator wasn't turned on for the new app.

The latest app update will be named "rosetta". This is mainly because it is not backwards compatible with the current app for "rosetta scripts XML" protocols.
7) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6198)
Posted 91 days ago by Profile dekim
Please post issues/bugs regarding the 'rosetta_beta_4.0+' application versions here.
8) Message boards : RALPH@home bug list : Rosetta mini beta and/or android 3.61-3.83 (Message 6172)
Posted 220 days ago by Profile dekim
You can ignore those warnings. They are harmless. I will hopefully have those warnings removed in the next release soon.
9) Message boards : RALPH@home bug list : Rosetta mini beta and/or android 3.61-3.83 (Message 6171)
Posted 220 days ago by Profile dekim
please keep those going.
10) Message boards : RALPH@home bug list : Rosetta mini beta and/or android 3.61-3.83 (Message 6166)
Posted 225 days ago by Profile dekim
Since the android app is a separate application, the credit per decoy running average will only use results from android jobs. But there is the issue of possibly adding a correction factor to try to normalize the credits coming from the standard app vs the arm app given the same protocol. I'll have to look into this and it would require running some benchmarks and updating the standard app. The arm app is running the latest Rosetta version.


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