Name | RF_SAVE_ALL_OUT_NOJRAN_IGNORE_THE_REST_validation_env_g_pred_376_16903_1_0 |
Workunit | 4851249 |
Created | 14 Jun 2024, 10:45:57 UTC |
Sent | 14 Jun 2024, 15:11:38 UTC |
Report deadline | 15 Jun 2024, 15:11:38 UTC |
Received | 14 Jun 2024, 15:34:43 UTC |
Server state | Over |
Outcome | Computation error |
Client state | Compute error |
Exit status | 12 (0x0000000C) Unknown error code |
Computer ID | 50048 |
Run time | 5 min 19 sec |
CPU time | |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 3.43 GFLOPS |
Application version | Generalized biomolecular modeling and design with RoseTTAFold All-Atom v0.02 (nvidia_alpha) windows_x86_64 |
Peak working set size | 2,359.73 MB |
Peak swap size | 8,501.56 MB |
Peak disk usage | 2.11 MB |
<core_client_version>7.16.11</core_client_version> <![CDATA[ <message> Code d - exit code 12 (0xc)</message> <stderr_txt> Traceback (most recent call last): File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 708, in <module> pred.predict(out_name+f'_{n}', File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 551, in predict logit_s, logit_aa_s, logit_pae, logit_pde, p_bind, pred_crds, alpha, pred_allatom, pred_lddt_binned, msa_prev, pair_prev, state_prev = self.model( File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa\RoseTTAFoldModel.py", line 358, in forward msa, pair, xyz, alpha_s, xyz_allatom, state, symmsub = self.simulator( File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 1084, in forward msa_full, pair, xyz, state, alpha, symmsub = self.extra_block[i_m](msa_full, pair, File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 929, in forward xyz, state, alpha = self.str2str( File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\cuda\amp\autocast_mode.py", line 141, in decorate_autocast return func(*args, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 503, in forward shift = self.se3(G, node.reshape(B*L, -1, 1), l1_feats, edge_feats) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa\SE3_network.py", line 96, in forward return self.se3(G, node_features, edge_features) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa/SE3Transformer\se3_transformer\model\transformer.py", line 185, in forward node_feats = self.graph_modules(node_feats, edge_feats, graph=graph, basis=basis) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa/SE3Transformer\se3_transformer\model\transformer.py", line 47, in forward input = module(input, *args, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa/SE3Transformer\se3_transformer\model\layers\attention.py", line 162, in forward fused_key_value = self.to_key_value(node_features, edge_features, graph, basis) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl return forward_call(*input, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\cv2\rf2aa/SE3Transformer\se3_transformer\model\layers\convolution.py", line 319, in forward src, dst = graph.edges() File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\dgl\view.py", line 166, in __call__ return self._graph.all_edges(*args, **kwargs) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\dgl\heterograph.py", line 3417, in all_edges src, dst, eid = self._graph.edges(self.get_etype_id(etype), order) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\dgl\heterograph_index.py", line 609, in edges edge_array = _CAPI_DGLHeteroEdges(self, int(etype), order) File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\dgl\_ffi\_ctypes\function.py", line 188, in __call__ check_call(_LIB.DGLFuncCall( File "D:\BOINC_DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\dgl\_ffi\base.py", line 65, in check_call raise DGLError(py_str(_LIB.DGLGetLastError())) dgl._ffi.base.DGLError: [17:21:01] C:/Users/Administrator/dgl-0.5/src/array/cuda/array_op_impl.cu:259: Check failed: e == cudaSuccess || e == cudaErrorCudartUnloading: CUDA kernel launch error: out of memory </stderr_txt> ]]>
©2024 University of Washington
http://www.bakerlab.org