Posts by Evan

21) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4763)
Posted 28 Mar 2009 by Evan
Post:
compute error with:

1390773
1390766

both with message:

ERROR: ERROR: FragmentIO: could not open file aa9mer.1_3.gz
ERROR:: Exit from: ....srccorefragmentFragmentIO.cc line: 245
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

looks a similar fault to some already posted
22) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4758)
Posted 27 Mar 2009 by Evan
Post:
It seems that the work units that I downloaded this morning have an incomplete nomenclature. They are missing the final _0 or _1 that indicates whether it is a first or second attempt.


Correction! They are correct on the task list but missing on the work details on the website
23) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4757)
Posted 27 Mar 2009 by Evan
Post:
It seems that the work units that I downloaded this morning have an incomplete nomenclature. They are missing the final _0 or _1 that indicates whether it is a first or second attempt.
24) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4750)
Posted 22 Mar 2009 by Evan
Post:
Validate errors
1374039
1374038
1374037

All run for around 5 hours. No doubt the second run will take half the time or less as has happened in previous work units

25) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4743)
Posted 17 Mar 2009 by Evan
Post:
A PDB error this time on windows with this one:

1369045

Cannot open PDB file "1xqo_213.pdb"
ERROR:: Exit from: ....srccoreiopdbpose_io.cc line: 179
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish
26) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4725)
Posted 9 Mar 2009 by Evan
Post:
There are going to be quite few errors coming through until the system sorts itself out after the closure. I have had a good number of ghost work units reportedly downloaded to me but I can't find them. They have been already been reported as successes and rewarded points but handed out again.
27) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4724)
Posted 6 Mar 2009 by Evan
Post:
validate error:
all first time runs
1329199
1329195
1329205
1329212
1329219
1329224


What causes a validation error? It would appear that my 6 errant work units are well on the way to have successful second runs.
28) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4722)
Posted 5 Mar 2009 by Evan
Post:
validate error:
all first time runs
1329199
1329195
1329205
1329212
1329219
1329224
29) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4689)
Posted 12 Feb 2009 by Evan
Post:
This one: 1150435 was a long one taking about 5 hours completing one decoy but given a validate error. I notice that its second attempt ended in immediate failure.

Also is it my imagination or are these units (cst__1_8_nativecst_b1.0_cen_0.1_hb_t313 etc) using more ram?
30) Message boards : RALPH@home bug list : minirosetta 1.58 (Message 4658)
Posted 2 Feb 2009 by Evan
Post:
Feet1st I am also using XP with the same resolution. On full screen the native box is approximately 6 cm high while the low energy box is about 5 cm. The energy graph takes a fair time to appear from the left and the rmsd graph takes even longer as you have described. It is probably being exemplified because I am going through some slow moving proteins (csttest)on 1.57.
31) Message boards : RALPH@home bug list : minirosetta v1.55 bug thread (Message 4638)
Posted 1 Feb 2009 by Evan
Post:
The 1.57 version doesn't show the protein in the searching box.


In addition the Accepted Energy and RMSD graphs take a long time to develop each time you turn on the graphics.
32) Message boards : RALPH@home bug list : minirosetta v1.48-1.51 bug thread (Message 4512)
Posted 24 Jan 2009 by Evan
Post:
This one failed (1st time)
1259966

Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x0044EFF4 read attempt to address 0x01062000

Engaging BOINC Windows Runtime Debugger...
33) Message boards : RALPH@home bug list : minirosetta v1.48-1.51 bug thread (Message 4509)
Posted 24 Jan 2009 by Evan
Post:
I'm showing the same or very similar behavior on the same type of workunit:lr6_D_score12_rlbn_1gu3_IGNORE_THE_REST_NATIVE_6909


I'm also getting problems on several work units starting: test_B_cc ....
I get either a hung empty screen or a runtime error.

edit The graphics problem doesn't affect progress of the work unit.
34) Message boards : RALPH@home bug list : minirosetta v1.48-1.51 bug thread (Message 4490)
Posted 22 Jan 2009 by Evan
Post:
The mammoths have not been having a happy time. I have had a run of 23 failures (1st time) including:


unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x0081E942 read attempt to address 0x00000000

and

ERROR: unknown model name: 1B0NA_10
ERROR:: Exit from: d:boinc_buildminirosetta_windowsminisrcprotocols/abinitio/PairingStatistics.hh line: 170
called boinc_finish




35) Message boards : RALPH@home bug list : minirosetta v1.48-1.51 bug thread (Message 4484)
Posted 22 Jan 2009 by Evan
Post:
Add these to the mammoth second time failures:

1257164
1257066
1257064
36) Message boards : RALPH@home bug list : minirosetta v1.48-1.51 bug thread (Message 4481)
Posted 22 Jan 2009 by Evan
Post:
This one 1256978 has failed for the second time.

Maybe the same problem as reported by Zdenek Vasku

[url]<core_client_version>6.2.19</core_client_version>
<![CDATA[
<message>
Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
BOINC:: Initializing ... ok.
[2009- 1-22 10:30:57:] :: BOINC :: boinc_init()
BOINC:: Setting up shared resources ... ok.
BOINC:: Setting up semaphores ... ok.
BOINC:: Updating status ... ok.
BOINC:: Registering timer callback... ok.
BOINC:: Worker initialized successfully.
Initializing options.... ok
Initializing random generators... ok
Initialization complete.
Watchdog active.

ERROR: unknown model name: 1DK8A_1
ERROR:: Exit from: d:boinc_buildminirosetta_windowsminisrcprotocols/abinitio/PairingStatistics.hh line: 170
called boinc_finish
[/quote]
37) Message boards : RALPH@home bug list : minirosetta v1.48-1.51 bug thread (Message 4477)
Posted 22 Jan 2009 by Evan
Post:
I don't see that in my boinc manager


You can find it in your slots directory. (v6.2.19) You will find the boinc_checkpoint_count file. Open it and you will see how many checkpoints you have. Also there is a list of the checkpoints.

My work unit has been running for for about 34 minutes and I have accumulated 43 checkpoints.

38) Message boards : RALPH@home bug list : Bug Reports for Minirosetta v1.39 (Message 4320)
Posted 29 Oct 2008 by Evan
Post:
This one 1173539 has failed for its second time.

Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x007D9F1F read attempt to address 0x00000000
39) Message boards : RALPH@home bug list : Bug Reports for Minirosetta v1.39 (Message 4315)
Posted 28 Oct 2008 by Evan
Post:
There seems to be some problem with the

hombench_olange_foldcst_single_alignment_foldcst_single_alignment_t312 and t313 units.

So far I have 8 fail within 28 seconds.


Add another 5 to the list
40) Message boards : RALPH@home bug list : Bug Reports for Minirosetta v1.39 (Message 4312)
Posted 27 Oct 2008 by Evan
Post:
There seems to be some problem with the

hombench_olange_foldcst_single_alignment_foldcst_single_alignment_t312 and t313 units.

So far I have 8 fail within 28 seconds.


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