minirosetta v1.20 bug thread

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James Thompson
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Message 4016 - Posted: 10 May 2008, 4:25:47 UTC

We have released a new version of minirosetta. Please report bugs related to v1.20 here.


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Message 4017 - Posted: 11 May 2008, 13:15:28 UTC

Much better;

v1.20 went four for four on my dual quaddie with 24 hr run time preference. these are the first successes I have had since v1.17 came out!

952658
952659
952664
952670
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Message 4019 - Posted: 13 May 2008, 11:47:01 UTC

Since my BOINC upgrade to 6.2.1 (protected service install), done in the middle of the short v1.19 era, I can see no protein-related graphical stuff displayed in minirosetta\'s graphics window, just progress%, CPU time and user info, which are displayed and being updated correctly.

Is it just a mini v1.20 issue, or is minirosetta not yet supposed to correctly display graphics in BOINC v6.x protected service installation (although I could see no reason for it, as the texts are fine)?

Peter
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Message 4020 - Posted: 13 May 2008, 13:10:37 UTC

A couple of more 24hr ?successes? on my win xp x64 machine:

953525
and
953526

but both have a bunch of messages saying:

\'can not open psipred_ss2 file tt\'
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Message 4022 - Posted: 14 May 2008, 11:26:52 UTC

Likewise i\'ve just had two success with v1.20 and get the same message:

<core_client_version>5.10.20</core_client_version>
<![CDATA[
<stderr_txt>
can not open psipred_ss2 file tt


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Path7

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Message 4023 - Posted: 14 May 2008, 21:00:03 UTC - in response to Message 4016.  

Hello all,
Running Windows XP this Workunit: 954459
casp7bench_t357_B_aaT0357_1VBGA_7_3691_4_0 has a validate error.
The PC has been rebooted while this WU was halfway.

In the message there is several times:
can not open psipred_ss2 file tt

Have a nice day,
Path7.
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Message 4025 - Posted: 15 May 2008, 4:39:47 UTC

Reporting my 1st error on minirosetta v1.20

Task ID 957313
Name ev_t331_A_S.1.1079_3708_2_0
Workunit 848582
CPU time 7.125
stderr out

<core_client_version>6.1.0</core_client_version>
<![CDATA[
<message>
Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
WARNING: Override of option -out:nstruct sets a different value

ERROR: NANs occured in hbonding!
ERROR:: Exit from: ..\\..\\src\\core\\scoring\\hbonds\\hbonds_geom.cc line: 763

called boinc_finish

</stderr_txt>

]]>


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Profile David Emigh
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Message 4026 - Posted: 15 May 2008, 5:10:57 UTC
Last modified: 15 May 2008, 5:15:25 UTC

Same error as Dr Who Fan received:

ERROR: NANs occurred in hbonding!

I was the wingman. Both this host, and the first to get this task failed in less than 7 seconds.

The host that received this error has successfully completed mini 1.20 work units previously, so this may be task specific.
RALPH and Rosie sittin' in a tree,
F - O - L - D - I - N - G!
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Message 4028 - Posted: 15 May 2008, 20:37:37 UTC - in response to Message 4016.  

Hello all,
Running Windows XP, having these errors:

Task ID: 957302 a Compute error, same as posted by Dr Who Fan & David Emigh.

Task ID: 959129 a Validate error,
<core_client_version>5.10.45</core_client_version>
<![CDATA[
<stderr_txt>
WARNING: Override of option -out:nstruct sets a different value
can not open psipred_ss2 file tt
# cpu_run_time_pref: 7200
can not open psipred_ss2 file tt
can not open psipred_ss2 file tt
can not open psipred_ss2 file tt
can not open psipred_ss2 file tt
WARNING: Override of option -out:nstruct sets a different value
can not open psipred_ss2 file tt
# cpu_run_time_pref: 7200

Have a nice day,
Path7.
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Message 4029 - Posted: 16 May 2008, 13:42:24 UTC

Looks like you haven\'t quite plugged up that leak/big file problem yet. Running with Boinc v5.10.45 on win xp x64, 24hr runtime preference, this one died after just short of 11 hours:

959541

same old 0xc0000005 with

- Virtual Memory Usage -
VirtualSize: 2127634432, PeakVirtualSize: 2127634432
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Message 4030 - Posted: 16 May 2008, 21:31:03 UTC

Another validate error running Windows XP:
Task ID: 959996

<core_client_version>5.10.45</core_client_version>
<![CDATA[
<stderr_txt>
WARNING: Override of option -out:nstruct sets a different value
can not open psipred_ss2 file tt
# cpu_run_time_pref: 7200
can not open psipred_ss2 file tt
can not open psipred_ss2 file tt
can not open psipred_ss2 file tt
can not open psipred_ss2 file tt
WARNING: Override of option -out:nstruct sets a different value
can not open psipred_ss2 file tt
# cpu_run_time_pref: 7200

Rosetta\'s 1.19 runs fine on this machine.

Have a nice weekend,
Path7.
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