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Minirosetta 1.67

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Message boards : RALPH@home bug list : Minirosetta 1.67

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mtyka
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Message 4815 - Posted 7 May 2009 7:45:41 UTC

    This should have the weired Etable bug solved as well as having a nifty new threading mode built in.

    Me go to bed now. Brain dead.

    Profile feet1st

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    Message 4816 - Posted 7 May 2009 15:23:12 UTC

      Please explain more about "nifty new threading mode" when you get a chance. Is this something we will see in the graphic? Or pursuing multiple models simultaneously? Or what? Will it take more memory to run?
      ____________

      Snagletooth

      Joined: May 4 07
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      Message 4817 - Posted 9 May 2009 11:02:55 UTC

        Last modified: 9 May 2009 11:08:30 UTC

        My Mac picked up a resend but broker_lb_test5_hb_t303__IGNORE_THE_REST_9495_5_1 crashed at the end of it's run with exit status 193

        # cpu_run_time_pref: 36000
        SIGBUS: bus error

        Crashed executable name: minirosetta_1.67_i686-apple-darwin
        built using BOINC library version 6.5.0
        Machine type Intel 80486 (32-bit executable)
        System version: Macintosh OS 10.5.6 build 9G55
        Sat May 9 04:58:40 2009

        sh: /usr/bin/atos: No such file or directory
        0 0x006c0345 SIGPIPE: write on a pipe with no reader
        1 0x004a3d8e SIGPIPE: write on a pipe with no reader
        2 0x90a9e2bb SIGPIPE: write on a pipe with no reader
        3 0xffffffff SIGPIPE: write on a pipe with no reader
        4 0x0002a4a7 SIGPIPE: write on a pipe with no reader
        5 0x000910d0 SIGPIPE: write on a pipe with no reader
        6 0x00518bdc SIGPIPE: write on a pipe with no reader
        7 0x00b59c20 SIGPIPE: write on a pipe with no reader
        8 0x0013b70a SIGPIPE: write on a pipe with no reader
        9 0x00005a5b SIGPIPE: write on a pipe with no reader
        10 0x0000292e SIGPIPE: write on a pipe with no reader
        11 0x00002855 SIGPIPE: write on a pipe with no reader
        12 0x00000019
        Thread 0 crashed with X86 Thread State (32-bit):
        eax: 0xffffffe1 ebx: 0x90a66802 ecx: 0xbfffc25c edx: 0x90a321c6
        edi: 0x00000000 esi: 0x00000000 ebp: 0xbfffc298 esp: 0xbfffc25c
        ss: 0x0000001f efl: 0x00000206 eip: 0x90a321c6 cs: 0x00000007
        ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037


        It previously failed on a computer using Linux:

        Exit status -185 (0xffffffffffffff47)
        Computer ID 17872
        Report deadline 11 May 2009 7:55:59 UTC
        CPU time 0
        stderr out

        <core_client_version>6.2.18</core_client_version>
        <![CDATA[
        <message>
        Input file minirosetta_database_rev29025.zip missing or invalid: -120
        </message>
        ]]>


        Mike, you might want to sticky this thread unless we're already giving up on 1.67 and going straight to 1.68

        Snags

        Snagletooth

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        Message 4818 - Posted 12 May 2009 22:48:32 UTC

          And another process exited with code 193 (0xc1, -63): lb_alnmatrix_thread4_hb_t286__IGNORE_THE_REST_9611_7_0

          Profile Krzychu P.

          Joined: Feb 16 06
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          Message 4819 - Posted 13 May 2009 5:53:26 UTC

            Hi,

            an error occured in this task:
            http://ralph.bakerlab.org/result.php?resultid=1439583

            with exit code:
            - exit code -1073741819 (0xc0000005)

            05/12/09 21:32:36|ralph@home|[task_debug] task_state=EXECUTING for lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 from start
            05/12/09 21:34:55|ralph@home|[task_debug] result lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 checkpointed
            05/12/09 21:36:55|ralph@home|[task_debug] result lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 checkpointed
            05/12/09 21:38:14|ralph@home|[task_debug] Process for lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 exited
            05/12/09 21:38:14|ralph@home|[task_debug] task_state=EXITED for lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 from handle_exited_app
            05/12/09 21:38:14|ralph@home|[task_debug] result state=COMPUTE_ERROR for lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 from CS::report_result_error
            05/12/09 21:38:14|ralph@home|[task_debug] Process for lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 exited
            05/12/09 21:38:14|ralph@home|[task_debug] exit code -1073741819 (0xc0000005):
            05/12/09 21:38:14|ralph@home|Computation for task lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 finished
            05/12/09 21:38:14|ralph@home|Output file lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0_0 for task lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 absent
            05/12/09 21:38:14|ralph@home|[task_debug] result state=COMPUTE_ERROR for lb_alnmatrix_brokerthread_hb_t360__IGNORE_THE_REST_9669_7_0 from CS::app_finished


            ____________

            Pepo
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            Message 4820 - Posted 15 May 2009 12:03:06 UTC - in response to Message 4819.

              an error occured in this task:
              http://ralph.bakerlab.org/result.php?resultid=1439583

              with exit code:
              - exit code -1073741819 (0xc0000005)

              Apparently the same error happened to my task lb_alnmatrix_brokerthread_hb_t328__IGNORE_THE_REST_9664_17_0 - error 1073741819 (0xffffffffc0000005), "Access Violation (0xc0000005) at address 0x0088A3C2 write attempt to address 0x00000000", broken stack for the errored thread, BOINC Windows Runtime Debugger dump is available.

              Windows XP SP3, BOINC 6.6.23.

              Profile ChertseyAl
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              Message 4823 - Posted 17 May 2009 10:08:44 UTC

                Quite a few compute errors (about 10%), both XP and Linux, all error -161:

                frb_0_8_mike_chosen_cst_mergefrag_hb_t293__IGNORE_THE_REST_1NV8A_16_9981_1
                http://ralph.bakerlab.org/workunit.php?wuid=1288232
                http://ralph.bakerlab.org/result.php?resultid=1453676
                XP

                gen2_direct_frag_cst_filt5_hb_t305__IGNORE_THE_REST_2AHSA_6_9896_1
                http://ralph.bakerlab.org/workunit.php?wuid=1283845
                http://ralph.bakerlab.org/result.php?resultid=1449190
                XP

                gen2_seqrelax_200_cst_hb_t305__IGNORE_THE_REST_2AHSA_2_9836_1
                http://ralph.bakerlab.org/workunit.php?wuid=1282082
                http://ralph.bakerlab.org/result.php?resultid=1447381
                Linux

                gen2_direct_frag_cst_hb_t305__IGNORE_THE_REST_1RPMA_5_9816_1
                http://ralph.bakerlab.org/workunit.php?wuid=1281311
                http://ralph.bakerlab.org/result.php?resultid=1446587
                XP

                gen2_direct_frag_cst_hb_t305__IGNORE_THE_REST_1YFOA_4_9816_1
                http://ralph.bakerlab.org/workunit.php?wuid=1281305
                http://ralph.bakerlab.org/result.php?resultid=1446581
                XP

                frb_0_8_mike_chosen_cst_9mer_hb_t305__IGNORE_THE_REST_1RPMA_4_9736_1
                http://ralph.bakerlab.org/workunit.php?wuid=1278259
                http://ralph.bakerlab.org/result.php?resultid=1444761
                XP

                Al.


                Message boards : RALPH@home bug list : Minirosetta 1.67


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