Rosetta_beta 4.0+

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Profile dekim
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Message 6198 - Posted: 18 Aug 2017, 20:04:12 UTC
Last modified: 18 Aug 2017, 23:55:41 UTC

Please post issues/bugs regarding the 'rosetta_beta_4.0+' application versions here.
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Dr. Merkwürdigliebe

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Message 6199 - Posted: 19 Aug 2017, 15:11:16 UTC

I would love to try but there is no work available.
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Message 6200 - Posted: 20 Aug 2017, 21:37:13 UTC - in response to Message 6199.  

I would love to try but there is no work available.


+1

P.S. Is this version the beginning of new "c++ wave"??
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Message 6201 - Posted: 21 Aug 2017, 20:52:08 UTC - in response to Message 6200.  

Sorry, I was busy during the weekend and only added a small batch just in case there were issues. I also noticed the assimilator and validator wasn't turned on for the new app.

The latest app update will be named "rosetta". This is mainly because it is not backwards compatible with the current app for "rosetta scripts XML" protocols.
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Profile [VENETO] boboviz

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Message 6202 - Posted: 22 Aug 2017, 20:52:46 UTC

Screensaver is black on all my computers (3 Windows 10)
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Message 6203 - Posted: 22 Aug 2017, 22:37:56 UTC - in response to Message 6202.  
Last modified: 22 Aug 2017, 22:48:48 UTC

Yes, I just updated the app to 4.02 to address this.

The issue was that we are using the new BOINC graphics api which uses a new to us font rendering framework. The BOINC ttfont.cpp code necessary for the fonts to work does not resolve the filename (using the boinc_resolve_filename api function) of the ttf font file so the graphics app would crash under the boinc client but not with a local test. This is because we passed the current run directory to the ttf_load_fonts function and not the project directory. Luckily it didn't take me that long to find the cause of this bug and hopefully I fixed it.
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Message 6204 - Posted: 23 Aug 2017, 19:47:37 UTC - in response to Message 6203.  

Yes, I just updated the app to 4.02 to address this.


The screensaver is not so important (i report this only for bugfixing), but thanks anyway
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Message 6205 - Posted: 27 Aug 2017, 10:57:07 UTC - in response to Message 6203.  

Yes, I just updated the app to 4.02 to address this....

..... to find the cause of this bug and hopefully I fixed it.


Obviously we volunteers need some wus to test it!! :-P
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Profile [VENETO] boboviz

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Message 6206 - Posted: 28 Aug 2017, 19:03:29 UTC

Avg free stops the new screensaver as "suspect".
I resolved this problem adding \Appdata\Roaming\Ralph folder as exception
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Message 6207 - Posted: 29 Aug 2017, 17:39:03 UTC - in response to Message 6206.  

Aside from this issue, are the graphics ok?
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Message 6208 - Posted: 29 Aug 2017, 20:21:10 UTC - in response to Message 6207.  

Aside from this issue, are the graphics ok?


Yes!
With the return of classic "all black" background.
No more blue :-P

P.S.
If i'm not wrong, blue background has a scientific motivation...
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Profile [VENETO] boboviz

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Message 6216 - Posted: 5 Oct 2017, 15:19:53 UTC
Last modified: 5 Oct 2017, 15:20:31 UTC

Rosetta beta 4.04 seems to be good on Win 10 64 bit
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Message 6222 - Posted: 3 Nov 2017, 4:14:14 UTC

Workunit 3680728 FAILED immediately upon starting for BOTH ME & WING PERSON.

Task# 4172557
Exit status -185 (0xffffffffffffff47)

application version 4.05

Name: rb_05_04_73708_117593__t000__ab_robetta_IGNORE_THE_REST_20692_26445_1

stderr out	
<core_client_version>7.8.3</core_client_version>
<![CDATA[
<message>
couldn't start app: CreateProcess() failed - (unknown error)</message>
]]>



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Message 6223 - Posted: 3 Nov 2017, 5:23:14 UTC

One of my computers ran a few tasks for rosetta_beta_4.05 under Windows 10.

All failed in less than one minute each, with error messages suggesting that the application has problems reading something in one of the input files.
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Message 6224 - Posted: 3 Nov 2017, 5:31:12 UTC

All of my rosetta_beta_4.05 WUs also failed immediately after start.
Actually it even can not start - BOINC fails to launch R@H process.

And if I try to launch rosetta_beta_4.05_windows_intelx86.exe from project folder - there is an error about "rosetta_beta_4.05_windows_intelx86.exe is not a Win32 application".
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Maurice Goulois

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Message 6225 - Posted: 3 Nov 2017, 5:33:20 UTC
Last modified: 3 Nov 2017, 5:38:42 UTC

Different error but all fail on pc 38733: (ubuntu 16.04 LTS)

<code><core_client_version>7.8.3</core_client_version>
<![CDATA[
<message>
finish file present too long</message>
<stderr_txt>
command: ../../projects/ralph.bakerlab.org/rosetta_beta_4.05_x86_64-pc-linux-gnu @flags_rb_05_04_73708_117593__t000__ab_robetta -in:file:boinc_wu_zip input_rb_05_04_73708_117593__t000__ab_robetta.zip -in:file:fasta t000_.fasta -frag3 t000_.200.3mers.gz -fragB t000_.200.3mers.gz -fragA t000_.200.9mers.gz -constraints::cst_file t000_.fasta.CB.cst -constraints:cst_weight 3.0 -constraints::cst_fa_file t000_.fasta.MIN.cst -constraints:cst_fa_weight 3.0 -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2635422
Starting watchdog...
Watchdog active.

ERROR: unrecognized aa type OU3_ALA
ERROR:: Exit from: src/core/chemical/AA.cc line: 270
</code>
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Message 6226 - Posted: 3 Nov 2017, 5:55:21 UTC

Sorry! I've canceled this test batch. Looks like a database issue I'll have to troubleshoot.
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Message 6227 - Posted: 3 Nov 2017, 6:33:04 UTC - in response to Message 6225.  

ERROR: unrecognized aa type OU3_ALA
ERROR:: Exit from: src/core/chemical/AA.cc line: 270
</code>


+1
All my wus in Win10.
Hope this help the debug
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Message 6228 - Posted: 3 Nov 2017, 13:48:35 UTC

I had errors with the output file in Linux. They had compute errors in 9 seconds each.

http://ralph.bakerlab.org/forum_thread.php?id=589
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Profile [VENETO] boboviz

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Message 6229 - Posted: 9 Nov 2017, 9:44:40 UTC

No work to test :-(

P.S.
Do you plan to upgrade also the android version with 4.x wave?
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