Task 3998595

Name ab_12_01__vall_2011_1dhnA_vall_2011_9mers_3mers_20564_134_0
Workunit 3521285
Created 26 Jan 2017, 16:01:42 UTC
Sent 31 Jan 2017, 7:15:05 UTC
Report deadline 2 Feb 2017, 7:15:05 UTC
Received 31 Jan 2017, 8:00:31 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 11 (0x0000000B) Unknown error code
Computer ID 38654
Run time
CPU time 40 min 54 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 0.00 GFLOPS
Application version ---

Stderr output

<core_client_version>7.4.53</core_client_version>
<![CDATA[
<message>
process got signal 11
</message>
<stderr_txt>
[2017- 1-31  2:15:16:] :: BOINC:: Initializing ... ok.
[2017- 1-31  2:15:16:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.77_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1dhnA.pdb -in::file::fasta ab_12_01__vall_2011__1dhnA.fasta -psipred_ss2 ab_12_01__vall_2011__1dhnA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1dhnA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1dhnA.200.3mers.index -fragA ab_12_01__vall_2011__1dhnA.200.9mers.index -fragB ab_12_01__vall_2011__1dhnA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2705641
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Unpacking zip data: ../../projects/ralph.bakerlab.org/minirosetta_database_0cb8dc1_A.zip
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
======================================================
DONE ::     1 starting structures  2453.43 cpu seconds
This process generated      1 decoys from       1 attempts
======================================================
BOINC :: WS_max 1.01409e+08

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
02:58:33 (16714): called boinc_finish(0)

</stderr_txt>
]]>




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