Task 4010903

Name ab_12_01__vall_2011_1a19A_vall_2011_9mers_3mers_20564_171_0
Workunit 3530792
Created 14 Feb 2017, 2:56:03 UTC
Sent 29 Mar 2017, 19:28:54 UTC
Report deadline 31 Mar 2017, 19:28:54 UTC
Received 31 Mar 2017, 1:10:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 38725
Run time
CPU time 11 hours 55 min 34 sec
Validate state Valid
Credit 246.95
Device peak FLOPS 0.00 GFLOPS
Application version ---

Stderr output

<core_client_version>7.4.53</core_client_version>
<![CDATA[
<stderr_txt>
[2017- 3-29 14:18:50:] :: BOINC:: Initializing ... ok.
[2017- 3-29 14:18:50:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1a19A.pdb -in::file::fasta ab_12_01__vall_2011__1a19A.fasta -psipred_ss2 ab_12_01__vall_2011__1a19A.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1a19A.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1a19A.200.3mers.index -fragA ab_12_01__vall_2011__1a19A.200.9mers.index -fragB ab_12_01__vall_2011__1a19A.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2706504
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Unpacking zip data: ../../projects/ralph.bakerlab.org/minirosetta_database_ac6fa1b.zip
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
# cpu_run_time_pref: 43200
Starting work on structure: _00002
Starting work on structure: _00003
Starting work on structure: _00004
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
Starting work on structure: _00008
Starting work on structure: _00009
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
Starting work on structure: _00013
[2017- 3-29 20:36:28:] :: BOINC:: Initializing ... ok.
[2017- 3-29 20:36:28:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1a19A.pdb -in::file::fasta ab_12_01__vall_2011__1a19A.fasta -psipred_ss2 ab_12_01__vall_2011__1a19A.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1a19A.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1a19A.200.3mers.index -fragA ab_12_01__vall_2011__1a19A.200.9mers.index -fragB ab_12_01__vall_2011__1a19A.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2706504
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
# cpu_run_time_pref: 43200
Starting work on structure: _00013
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_2 ... success! 
[2017- 3-30  9:32:27:] :: BOINC:: Initializing ... ok.
[2017- 3-30  9:32:27:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1a19A.pdb -in::file::fasta ab_12_01__vall_2011__1a19A.fasta -psipred_ss2 ab_12_01__vall_2011__1a19A.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1a19A.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1a19A.200.3mers.index -fragA ab_12_01__vall_2011__1a19A.200.9mers.index -fragB ab_12_01__vall_2011__1a19A.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2706504
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
# cpu_run_time_pref: 43200
Starting work on structure: _00013
Continuing computation from checkpoint: chk_S_00000013_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_2 ... success! 
Starting work on structure: _00014
Starting work on structure: _00015
Starting work on structure: _00016
Starting work on structure: _00017
Starting work on structure: _00018
Starting work on structure: _00019
Starting work on structure: _00020
Starting work on structure: _00021
Starting work on structure: _00022
Starting work on structure: _00023
Starting work on structure: _00024
Starting work on structure: _00025
Starting work on structure: _00026
Starting work on structure: _00027
======================================================
DONE ::     1 starting structures  42933.5 cpu seconds
This process generated     27 decoys from      27 attempts
======================================================
BOINC :: WS_max 0
BOINC :: BOINC support services shutting down cleanly ...
18:10:33 (29018): called boinc_finish(0)

</stderr_txt>
]]>




©2024 University of Washington
http://www.bakerlab.org