Task 5457838

Name RF_SAVE_ALL_OUT_NOJRAN_IGNORE_THE_REST_validation_env_f_pred_244_16902_6_0
Workunit 4848076
Created 13 Jun 2024, 2:21:15 UTC
Sent 13 Jun 2024, 6:13:33 UTC
Report deadline 14 Jun 2024, 6:13:33 UTC
Received 13 Jun 2024, 7:11:51 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 0 (0x00000000)
Computer ID 48783
Run time 41 min 50 sec
CPU time 1 min 16 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5.29 GFLOPS
Application version Generalized biomolecular modeling and design with RoseTTAFold All-Atom v0.02 (nvidia_alpha)
windows_x86_64
Peak working set size 3,977.43 MB
Peak swap size 8,341.92 MB
Peak disk usage 2.33 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
Traceback (most recent call last):
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 708, in <module>
    pred.predict(out_name+f'_{n}', 
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 551, in predict
    logit_s, logit_aa_s, logit_pae, logit_pde, p_bind, pred_crds, alpha, pred_allatom, pred_lddt_binned,                msa_prev, pair_prev, state_prev = self.model(
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\cv2\rf2aa\RoseTTAFoldModel.py", line 358, in forward
    msa, pair, xyz, alpha_s, xyz_allatom, state, symmsub = self.simulator(
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 1135, in forward
    dljdxyz, dljdalpha = calc_lj_grads(
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\autograd\grad_mode.py", line 28, in decorate_context
    return func(*args, **kwargs)
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\cv2\rf2aa\loss.py", line 1316, in calc_lj_grads
    Elj = calc_lj(
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\cv2\rf2aa\loss.py", line 1143, in calc_lj
    ljval = lj(
  File "D:\BOINC\DATA\projects\ralph.bakerlab.org\cv2\rf2aa\loss.py", line 1070, in forward
    ai,aj,seqi,seqj,ridx = ai[mask],aj[mask],seqi[mask],seqj[mask],ridx[mask]
RuntimeError: CUDA out of memory. Tried to allocate 30.00 MiB (GPU 0; 2.00 GiB total capacity; 1.56 GiB already allocated; 0 bytes free; 1.71 GiB reserved in total by PyTorch)
09:09:39 (25712): called boinc_finish(0)

</stderr_txt>
<message>
upload failure: <file_xfer_error>
  <file_name>RF_SAVE_ALL_OUT_NOJRAN_IGNORE_THE_REST_validation_env_f_pred_244_16902_6_0_r1110794168_0</file_name>
  <error_code>-240 (stat() failed)</error_code>
</file_xfer_error>
</message>
]]>




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