Task 5465066

Name RF_SAVE_ALL_OUT_NOJRAN_IGNORE_THE_REST_validation_env_g_pred_162_16903_1_1
Workunit 4849918
Created 15 Jun 2024, 6:16:23 UTC
Sent 15 Jun 2024, 6:16:35 UTC
Report deadline 16 Jun 2024, 6:16:35 UTC
Received 15 Jun 2024, 8:27:24 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 40032
Run time 1 hours 42 min 8 sec
CPU time
Validate state Valid
Credit 212.13
Device peak FLOPS 5.06 GFLOPS
Application version Generalized biomolecular modeling and design with RoseTTAFold All-Atom v0.02 (nvidia_alpha)
windows_x86_64
Peak working set size 4,184.49 MB
Peak swap size 8,908.20 MB
Peak disk usage 3.86 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
Traceback (most recent call last):
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 708, in <module>
    pred.predict(out_name+f'_{n}', 
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 551, in predict
    logit_s, logit_aa_s, logit_pae, logit_pde, p_bind, pred_crds, alpha, pred_allatom, pred_lddt_binned,                msa_prev, pair_prev, state_prev = self.model(
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\RoseTTAFoldModel.py", line 358, in forward
    msa, pair, xyz, alpha_s, xyz_allatom, state, symmsub = self.simulator(
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 1135, in forward
    dljdxyz, dljdalpha = calc_lj_grads(
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\autograd\grad_mode.py", line 28, in decorate_context
    return func(*args, **kwargs)
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\loss.py", line 1316, in calc_lj_grads
    Elj = calc_lj(
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\loss.py", line 1143, in calc_lj
    ljval = lj(
  File "D:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\loss.py", line 1043, in forward
    intrares = (rii[ridx]==rjj[ridx])
RuntimeError: CUDA out of memory. Tried to allocate 60.00 MiB (GPU 0; 8.00 GiB total capacity; 1.53 GiB already allocated; 0 bytes free; 1.77 GiB reserved in total by PyTorch)
03:58:47 (49972): called boinc_finish(0)

</stderr_txt>
]]>




©2024 University of Washington
http://www.bakerlab.org