Message boards : RALPH@home bug list : Bug reports for Ralph 5.30 and 5.31 and 5.32
Author | Message |
---|---|
Rhiju Volunteer moderator Project developer Project scientist Send message Joined: 14 Feb 06 Posts: 161 Credit: 3,725 RAC: 0 |
Thanks for your help in our updates over the last week! This one may be our last, or our second-to-last one, before update Rosetta@home. We're testing a new strategy for folding that will allow rosetta to handle non-linear protein topologies with all the atoms present. We already have a version of this protocol ("jumping") in earlier versions, but it couldn't handle all the sidechain atoms. |
Norman_RKN Send message Joined: 26 Mar 06 Posts: 5 Credit: 4,877 RAC: 0 |
Unzul�ssige Funktion. (0x1) - exit code 1 (0x1) </message> <stderr_txt> # cpu_run_time_pref: 3600 # random seed: 2897923 ERROR:: Exit at: .chuck.cc line:1028 </stderr_txt> 08.10.2006 08:54:59|ralph@home|Unrecoverable error for result JUMPTEST_POSERELAX_1tul__1336_10_0 (Unzulässige Funktion. (0x1) - exit code 1 (0x1)) ------------------ 08.10.2006 09:16:03|ralph@home|Unrecoverable error for result JUMPTEST_POSERELAX_1tul__1336_19_0 (Unzulässige Funktion. (0x1) - exit code 1 (0x1)) <core_client_version>5.5.0</core_client_version> <message> Unzul�ssige Funktion. (0x1) - exit code 1 (0x1) </message> <stderr_txt> # random seed: 2897914 # cpu_run_time_pref: 3600 ERROR:: Exit at: .chuck.cc line:1028 </stderr_txt> 285228 285274 |
SafeAggie Send message Joined: 5 Oct 06 Posts: 6 Credit: 4,207 RAC: 0 |
Unrecoverable error for result IDL_RLX_NT_t305_CASP7_hom001_1_1335_6_0 (<file_xfer_error> <file_name>IDL_RLX_NT_t305_CASP7_hom001_1_1335_6_0_0</file_name> <error_code>-161</error_code></file_xfer_error>) resultid=284811 |
paul and kirsty yates Send message Joined: 16 Feb 06 Posts: 11 Credit: 949 RAC: 0 |
just got another error on this one 08/10/2006 14:35:41|ralph@home|Unrecoverable error for result IDL_RLX_NT_t304_CASP7_hom001_1_1332_7_1 (<file_xfer_error> <file_name>IDL_RLX_NT_t304_CASP7_hom001_1_1332_7_1_0</file_name> <error_code>-161</error_code></file_xfer_error>) <core_client_version>5.4.11</core_client_version> <stderr_txt> ERROR:: Unable to determine sequence length from pdb file ====================================================== DONE :: 1 starting structures built 5 (nstruct) times This process generated 0 decoys from 0 attempts 1 starting pdbs were skipped ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down... </stderr_txt> <message> <file_xfer_error> <file_name>IDL_RLX_NT_t296_CASP7_hom001_1_1332_7_2_0</file_name> <error_code>-161</error_code> </file_xfer_error> </message> |
William Senn Send message Joined: 16 Feb 06 Posts: 4 Credit: 30,895 RAC: 0 |
Hi, Reporting an error as can be seen in result 285411: resultid=285411 Hope it helps you... Cheers, William Senn... |
Pieface Send message Joined: 16 Feb 06 Posts: 64 Credit: 203,513 RAC: 0 |
I'm also getting a couple of errors on the jumptest units: resid 285431 and resid 285518 error info was: Incorrect function. (0x1) - exit code 1 (0x1) </message> <stderr_txt> # random seed: 2897927 ERROR:: Exit at: .chuck.cc line:1028 |
Rhiju Volunteer moderator Project developer Project scientist Send message Joined: 14 Feb 06 Posts: 161 Credit: 3,725 RAC: 0 |
Thanks to everyone for posting! I'm working on the fix. Hopefully it will go into an update later today, but that might get delayed. Several of our computers are down today because of an air conditioning problem. I'm also getting a couple of errors on the jumptest units: |
paul and kirsty yates Send message Joined: 16 Feb 06 Posts: 11 Credit: 949 RAC: 0 |
|
Mike Gelvin Send message Joined: 17 Feb 06 Posts: 50 Credit: 55,397 RAC: 0 |
A -161 error https://ralph.bakerlab.org/workunit.php?wuid=248602 |
SafeAggie Send message Joined: 5 Oct 06 Posts: 6 Credit: 4,207 RAC: 0 |
Unrecoverable error for result IDL_RLX_NT_t326_CASP7_hom001_1_1335_6_0 (Incorrect function. (0x1) - exit code 1 (0x1)) resultid=284828 |
Rhiju Volunteer moderator Project developer Project scientist Send message Joined: 14 Feb 06 Posts: 161 Credit: 3,725 RAC: 0 |
Ralph 5.31 should fix some of the issues that you reported. The other issues were apparently not due to the new application but due to a bad workunit, and is getting fixed. Thanks for your help in our updates over the last week! |
SafeAggie Send message Joined: 5 Oct 06 Posts: 6 Credit: 4,207 RAC: 0 |
Unrecoverable error for result IDL_RLX_NT_t339_CASP7_hom001_1_1335_6_0 (One or more arguments are invalid (0x80000003) - exit code -2147483645 (0x80000003)) resultid=284837 |
Tobie Send message Joined: 4 Oct 06 Posts: 3 Credit: 582 RAC: 0 |
09/10/06 14:34:39 PM|ralph@home|Starting task IDL_RLX_NT_t345_CASP7_hom001_1_1332_10_2 using rosetta_beta version 531 09/10/06 14:35:16 PM||Rescheduling CPU: application exited 09/10/06 14:35:16 PM|ralph@home|Computation for task IDL_RLX_NT_t345_CASP7_hom001_1_1332_10_2 finished 09/10/06 14:35:16 PM|ralph@home|Starting task IDL_RLX_NT_t350_CASP7_hom001_1_1332_10_2 using rosetta_beta version 531 09/10/06 14:35:18 PM|ralph@home|Unrecoverable error for result IDL_RLX_NT_t345_CASP7_hom001_1_1332_10_2 (<file_xfer_error> <file_name>IDL_RLX_NT_t345_CASP7_hom001_1_1332_10_2_0</file_name> <error_code>-161</error_code></file_xfer_error>) 09/10/06 14:35:18 PM|ralph@home|Deferring scheduler requests for 1 minutes and 0 seconds 09/10/06 14:35:48 PM||Rescheduling CPU: application exited 09/10/06 14:35:48 PM|ralph@home|Computation for task IDL_RLX_NT_t350_CASP7_hom001_1_1332_10_2 finished 09/10/06 14:35:49 PM|ralph@home|Unrecoverable error for result IDL_RLX_NT_t350_CASP7_hom001_1_1332_10_2 (<file_xfer_error> <file_name>IDL_RLX_NT_t350_CASP7_hom001_1_1332_10_2_0</file_name> <error_code>-161</error_code></file_xfer_error>) 09/10/06 14:35:49 PM|ralph@home|Deferring scheduler requests for 1 minutes and 0 seconds |
[B^S] thierry@home Send message Joined: 15 Feb 06 Posts: 20 Credit: 17,624 RAC: 0 |
I have a WU: JUMPTEST_POSERELAX_VARY_BOND_ANGLES_1tul__1336_32_0 (5.31) stuck at 1% - Model 1 - Step 360000 for 20 minutes. Then starts working. |
[B^S] thierry@home Send message Joined: 15 Feb 06 Posts: 20 Credit: 17,624 RAC: 0 |
I have a WU: JUMPTEST_POSERELAX_VARY_BOND_ANGLES_1tul__1336_32_0 (5.31) After 45 minutes: step 360131 but still at 1%. Don't know if it's normal or not. |
Brian B Send message Joined: 17 Feb 06 Posts: 9 Credit: 2,632 RAC: 0 |
This wu/result failed with these messages: 10/09/2006 09:03:07 PM|ralph@home|Starting result IDL_RLX_NT_t376_CASP7_hom001_1_1332_1_2 using rosetta_beta version 530 10/09/2006 09:03:33 PM|ralph@home|Sending scheduler request to https://ralph.bakerlab.org/ralph_cgi/cgi 10/09/2006 09:03:33 PM|ralph@home|Reason: To fetch work 10/09/2006 09:03:33 PM|ralph@home|Requesting 8640 seconds of new work 10/09/2006 09:03:38 PM|ralph@home|Scheduler request to https://ralph.bakerlab.org/ralph_cgi/cgi succeeded 10/09/2006 09:03:40 PM|ralph@home|Started download of rosetta_beta_5.31_windows_intelx86.exe 10/09/2006 09:03:40 PM|ralph@home|Started download of 1BRC.pdb 10/09/2006 09:03:43 PM||request_reschedule_cpus: process exited 10/09/2006 09:03:43 PM|ralph@home|Computation for result IDL_RLX_NT_t376_CASP7_hom001_1_1332_1_2 finished 10/09/2006 09:03:44 PM|ralph@home|Unrecoverable error for result IDL_RLX_NT_t376_CASP7_hom001_1_1332_1_2 (<file_xfer_error> <file_name>IDL_RLX_NT_t376_CASP7_hom001_1_1332_1_2_0</file_name> <error_code>-161</error_code> <error_message></error_message></file_xfer_error>) This was on 5.30 though... Good luck |
rbpeake Send message Joined: 16 Feb 06 Posts: 19 Credit: 3,370 RAC: 0 |
Result ID 286395 Name DOC_1WEJ_u_pert_mcm_bbmin_1338_8_0 Workunit 252472 Created 9 Oct 2006 22:58:45 UTC Sent 9 Oct 2006 23:06:02 UTC Received 10 Oct 2006 2:07:08 UTC Server state Over Outcome Validate error Client state Done Exit status 0 (0x0) Computer ID 2078 Report deadline 13 Oct 2006 23:06:02 UTC CPU time 5628.653606 stderr out <core_client_version>5.6.5</core_client_version> <![CDATA[ <stderr_txt> # random seed: 2896945 # cpu_run_time_pref: 7200 WARNING! error deleting file .aa1WEJ.out WARNING! error deleting file .aa1WEJ.out.bonds WARNING! error deleting file .aa1WEJ.out.rot_templates ====================================================== DONE :: 1 starting structures built 3 (nstruct) times This process generated 3 decoys from 4 attempts 0 starting pdbs were skipped ====================================================== BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down... </stderr_txt> ]]> Validate state Invalid Claimed credit 9.54912155099347 Granted credit 0 application version 5.31 |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
>>> Getting a few errors:- https://ralph.bakerlab.org/workunit.php?wuid=252767 https://ralph.bakerlab.org/workunit.php?wuid=252768 Windows machine, getting error message "Incorrect function. (0x1)-exit code 1 (0x1) ERROR:: Exit at: dock_structure.cc line:431" Also error on Linux machine:- https://ralph.bakerlab.org/workunit.php?wuid=252033 "process exited with code 1 (0x1) ERROR:: Exit at: dock_structure.cc line:431" Note:-- Thanks Chu for responding to my troubles with 5.28, hopefully I will have no more trouble like that, although I now have my 4800+ AMD machine duplicated across Ralph, Rosetta and Einstein projects, I will have to live with it. |
Chu Volunteer moderator Project developer Project scientist Send message Joined: 26 Sep 06 Posts: 61 Credit: 12,545 RAC: 0 |
We have noticed this kind of errors under 5.31 and just updated the app to 5.32. Hopefully it will be fixed. >>> Getting a few errors:- |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
> On my Windows machine, I am still having screensaver lockups. It has carried over from 5.28. The screensaver will be processing and showing data fine but after a long time on (probably greater than 1 hour?) when I move the mouse nothing happens and the screensaver is doing nothing either. Task manager shows the programme is still working fine but not the screensaver. I tried stopping BoincManager.exe and boinc.exe but this did nothing, I can still get the start menu up but unable to get rid of screensaver background. I was about to reboot when I thought to double click on the screensaver and my computer was returned to me. Has anyone else had this happen? Not a problem on Linux machines as they don't have the screensaver function. Can it be turned of in Windows? |
Message boards :
RALPH@home bug list :
Bug reports for Ralph 5.30 and 5.31 and 5.32
©2024 University of Washington
http://www.bakerlab.org