Bug Report for 5.46

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Chu
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Message 2793 - Posted: 12 Feb 2007, 1:08:49 UTC

Ralph has been updated to 5.46. In this update, we mainly fixed the problem of "false watchdog terminiation" for many docking workunits. For more information on this bug, please see here . Please continue to report bugs you caught on your computers here. Thank you.
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ziegenmelker

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Message 2794 - Posted: 12 Feb 2007, 3:27:13 UTC

Is this memory usage normal?

12/02/2007 02:41|ralph@home|Message from server: Your computer has 313.84MB of memory, and a job requires 476.84MB
12/02/2007 02:41|ralph@home|Message from server: No work sent
12/02/2007 02:41|ralph@home|Message from server: (there was work but your computer doesn't have enough memory)
12/02/2007 02:41|ralph@home|No work from project

This seems to be new, because this host has already crunched some WUs.

cu,
Micha
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Message 2795 - Posted: 12 Feb 2007, 5:20:17 UTC - in response to Message 2794.  

...and a job requires 476.84MB

Oh yeah. Let's see how will it go...

Peter
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Chu
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Message 2796 - Posted: 12 Feb 2007, 6:06:22 UTC - in response to Message 2794.  

Don't worry. This batch of docking WUs has a higher memory requirement because it attempts to handle relatively larger proteins. When other WUs are put in the queue which have normal memory requirement( I believe default is 256MB for this project), your computer will keep crunching.
Is this memory usage normal?

12/02/2007 02:41|ralph@home|Message from server: Your computer has 313.84MB of memory, and a job requires 476.84MB
12/02/2007 02:41|ralph@home|Message from server: No work sent
12/02/2007 02:41|ralph@home|Message from server: (there was work but your computer doesn't have enough memory)
12/02/2007 02:41|ralph@home|No work from project

This seems to be new, because this host has already crunched some WUs.

cu,
Micha

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Message 2797 - Posted: 12 Feb 2007, 14:27:10 UTC
Last modified: 12 Feb 2007, 14:31:23 UTC

I seem to have gotten a lot of 0x1 abends like this one overnite:

<core_client_version>5.8.8</core_client_version>
<![CDATA[
<message>
Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
# random seed: 2742938
ERROR:: Exit at: .loop_relax.cc line:1805

</stderr_txt>
]]>


Result

Edit: hmmm maybe not a lot like this one it seems they are mostly 5.45, but under 5.46 I did get two like this one and two that ran.

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Message 2798 - Posted: 12 Feb 2007, 23:01:47 UTC
Last modified: 12 Feb 2007, 23:05:06 UTC

I just had 4 of my machines err on WU like this one:

2im8_1_NMRREF_1_2im8_1_id_model_18IGNORE_THE_REST_idl_1758_3

On each machine they ran the same amount of time, I assume this is because of the different CPU/ RAM

C2D 2.4 Ghz 27 sec
Pent D 3.2 35 sec
3.06 Zeon 1 min 25 sec
P4 3.2 Ghz 1 min 45 sec
P4 1.6 Ghz 2 min 5 sec

All exited with an "Incorrect Function" error.

Edit: Mods: This post should actually go under the 5.45 Bug list, these WU's were still using it.
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ziegenmelker

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Message 2799 - Posted: 13 Feb 2007, 8:34:08 UTC - in response to Message 2797.  

I seem to have gotten a lot of 0x1 abends like this one overnite:

So do I.
<core_client_version>5.8.8</core_client_version>
<![CDATA[
<message>
Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
# random seed: 2742938
ERROR:: Exit at: .loop_relax.cc line:1805

</stderr_txt>
]]>


<core_client_version>5.4.9 BoincStudio 0.5.6 alpha</core_client_version>
<credit_correction>0</credit_correction>
<message>
process exited with code 1 (0x1)
</message>
<stderr_txt>
Graphics are disabled due to configuration...
# random seed: 2742419
ERROR:: Exit at: loop_relax.cc line:1803

</stderr_txt>

My quorum partners got the same errors.
https://ralph.bakerlab.org/results.php?hostid=6347

cu,
Micha
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Profile anders n

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Message 2801 - Posted: 15 Feb 2007, 6:46:35 UTC

Watch dog "kills"

https://ralph.bakerlab.org/result.php?resultid=431076

and

https://ralph.bakerlab.org/result.php?resultid=431783

Don't know the rate of this happening but 2 on my computers

the same night made me report.

Anders n



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Message 2802 - Posted: 17 Feb 2007, 15:04:24 UTC - in response to Message 2801.  
Last modified: 17 Feb 2007, 15:24:32 UTC

I have a strange bahaving unit:
https://ralph.bakerlab.org/result.php?resultid=434107

It got stuck at 46% and the status is "waiting for memory". I restarted computer but it didn't help.

I'll try changing preferences regarding memory and enlarge swap file.
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Message 2803 - Posted: 17 Feb 2007, 15:35:14 UTC - in response to Message 2802.  

I have a strange bahaving unit:
https://ralph.bakerlab.org/result.php?resultid=434107

It got stuck at 46% and the status is "waiting for memory". I restarted computer but it didn't help.

I'll try changing preferences regarding memory and enlarge swap file.


It is a big type of Wu-s. It took 4,5 H to do 1 decoy on my P4 2,8.

And used 150-200 in memory.

Anders n

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Message 2804 - Posted: 18 Feb 2007, 11:16:08 UTC - in response to Message 2803.  

It finished after setting memory usage "when in use" to 90%.

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Message boards : RALPH@home bug list : Bug Report for 5.46



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