Bug reports for 5.66-5.68

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dcdc

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Message 3202 - Posted: 15 Jun 2007, 12:19:06 UTC - in response to Message 3201.  

Yes, the failures do attempt to connect directly back to the project to report additional traces. And unfortunately with ZA, each version of Ralph AND Rosetta must be enabled. Please enable the current v5.68 by clicking the program control, and then the add button and selecting the .exe from your BOINC/projects folder

On Windows, the default path would be:
/Program Files/BOINC/Ralph.bakerlab.org/rosetta_beta_5.68_windows_intelx86

zonealarm used to have a \'changes frequently\' option that you could give to a program so it always allowed internet access. Don\'t know if that was just ZA Pro or not though...
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mdettweiler
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Message 3203 - Posted: 15 Jun 2007, 16:03:43 UTC - in response to Message 3202.  

zonealarm used to have a \'changes frequently\' option that you could give to a program so it always allowed internet access. Don\'t know if that was just ZA Pro or not though...


With each new application release, the Rosetta application\'s executable file name changes--the version number is part of the filename. Thus, there\'s no way a firewall would be able to keep track of the changes automatically.
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Profile anders n

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Message 3204 - Posted: 18 Jun 2007, 19:22:43 UTC

Any ideas how come these 2 Wu-s was ok on my computers and not the others?

http://ralph.bakerlab.org/workunit.php?wuid=484660

http://ralph.bakerlab.org/workunit.php?wuid=488628

Anders n
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Profile [AF>Le_Pommier] ninicool
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Message 3205 - Posted: 23 Jun 2007, 6:31:15 UTC

hello,
2 WU the same day with Outcome : \"client error\" :(

http://ralph.bakerlab.org/result.php?resultid=563532
http://ralph.bakerlab.org/result.php?resultid=563505

application version 5.68
BOINC manager : 5.8.15
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Profile anders n

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Message 3206 - Posted: 23 Jun 2007, 10:49:15 UTC

This one failed after restarting computer.

http://ralph.bakerlab.org/result.php?resultid=562489

Anders n
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Profile Conan
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Message 3207 - Posted: 23 Jun 2007, 12:59:00 UTC

2 Compute error Work Units, completed but failed file transfer, lost 12 hours of processing and get no credit for it.

this WU completed 24 decoys
and this one completed 12 decoys

CPU time 21377.666099
stderr out

<core_client_version>5.8.16</core_client_version>
<![CDATA[
<stderr_txt>
Graphics are disabled due to configuration...
# cpu_run_time_pref: 21600
# random seed: 2605311
======================================================
DONE :: 1 starting structures 21377.7 cpu seconds
This process generated 24 decoys from 24 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1HPR_BOINC_MFR_ABRELAX_2145_32_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

It would be nice if we got credits for the ones that complete but then have a problem uploading, has happened a number of times before.
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Profile [B^S] BOINC-SG

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Message 3208 - Posted: 23 Jun 2007, 20:14:52 UTC

Got 2 wu\'s, both got a compute error, one after almost an hour, the other one after appr. 37 minutes...

http://ralph.bakerlab.org/result.php?resultid=564016
http://ralph.bakerlab.org/result.php?resultid=564014




My NEW BOINC-Site

Why people joined BOINC Synergy...
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Profile EvoDude
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Message 3209 - Posted: 23 Jun 2007, 21:52:43 UTC

12 failures today - see below.

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Pepo
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Message 3210 - Posted: 23 Jun 2007, 22:04:09 UTC

Failed result 564114 from WU 499793 1IL4_BOINC_MFR_ABRELAX_2147_49 for unknown reason - all 3 machines exited with error -161.

Peter
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j2satx

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Message 3211 - Posted: 23 Jun 2007, 22:47:14 UTC

Result ID 564092
Name 1FAB_BOINC_MFR_ABRELAX_2143_14_1
Workunit 499439
Created 23 Jun 2007 17:50:22 UTC
Sent 23 Jun 2007 17:50:30 UTC
Received 23 Jun 2007 21:04:33 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 0 (0x0)
Computer ID 8764
Report deadline 27 Jun 2007 17:50:30 UTC
CPU time 6160.23699
stderr out

<core_client_version>5.9.11</core_client_version>
<![CDATA[
<stderr_txt>
Graphics are disabled due to configuration...
# cpu_run_time_pref: 7200
# random seed: 2605429
======================================================
DONE :: 1 starting structures 6160.24 cpu seconds
This process generated 3 decoys from 3 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1FAB_BOINC_MFR_ABRELAX_2143_14_1_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid
Claimed credit 20.2124723374978
Granted credit 0
application version 5.68
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j2satx

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Message 3212 - Posted: 23 Jun 2007, 22:48:06 UTC

Result ID 563167
Name 1HPR_BOINC_MFR_ABRELAX_2146_25_0
Workunit 499552
Created 23 Jun 2007 1:49:29 UTC
Sent 23 Jun 2007 2:02:31 UTC
Received 23 Jun 2007 8:58:28 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 0 (0x0)
Computer ID 7181
Report deadline 27 Jun 2007 2:02:31 UTC
CPU time 6826.246613
stderr out

<core_client_version>5.10.2</core_client_version>
<![CDATA[
<stderr_txt>
Graphics are disabled due to configuration...
# cpu_run_time_pref: 7200
# random seed: 2605268
======================================================
DONE :: 1 starting structures 6826.25 cpu seconds
This process generated 8 decoys from 8 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1HPR_BOINC_MFR_ABRELAX_2146_25_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid
Claimed credit 14.7995571907133
Granted credit 0
application version 5.68
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j2satx

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Message 3213 - Posted: 23 Jun 2007, 22:48:46 UTC

Result ID 563321
Name 1HPR_BOINC_MFR_ABRELAX_2146_39_0
Workunit 499692
Created 23 Jun 2007 2:29:49 UTC
Sent 23 Jun 2007 2:38:59 UTC
Received 23 Jun 2007 8:58:33 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 0 (0x0)
Computer ID 8763
Report deadline 27 Jun 2007 2:38:59 UTC
CPU time 7121.640625
stderr out

<core_client_version>5.10.2</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 7200
# random seed: 2605254
======================================================
DONE :: 1 starting structures 7120.73 cpu seconds
This process generated 8 decoys from 8 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1HPR_BOINC_MFR_ABRELAX_2146_39_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid
Claimed credit 29.4299883127254
Granted credit 0
application version 5.68
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j2satx

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Message 3214 - Posted: 23 Jun 2007, 22:49:28 UTC

Result ID 563617
Name 1FAB_BOINC_MFR_ABRELAX_2144_24_1
Workunit 499540
Created 23 Jun 2007 6:10:18 UTC
Sent 23 Jun 2007 6:10:25 UTC
Received 23 Jun 2007 17:42:55 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 0 (0x0)
Computer ID 8763
Report deadline 27 Jun 2007 6:10:25 UTC
CPU time 6887.484375
stderr out

<core_client_version>5.10.2</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 7200
# random seed: 2605369
======================================================
DONE :: 1 starting structures 6886.77 cpu seconds
This process generated 4 decoys from 4 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1FAB_BOINC_MFR_ABRELAX_2144_24_1_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid
Claimed credit 28.4623439083363
Granted credit 0
application version 5.68
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Rhiju
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Message 3215 - Posted: 24 Jun 2007, 2:42:41 UTC - in response to Message 3214.  

Hi:

We\'re looking at these now..


Result ID 563617
Name 1FAB_BOINC_MFR_ABRELAX_2144_24_1
Workunit 499540
Created 23 Jun 2007 6:10:18 UTC
Sent 23 Jun 2007 6:10:25 UTC
Received 23 Jun 2007 17:42:55 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 0 (0x0)
Computer ID 8763
Report deadline 27 Jun 2007 6:10:25 UTC
CPU time 6887.484375
stderr out

5.10.2

# cpu_run_time_pref: 7200
# random seed: 2605369
======================================================
DONE :: 1 starting structures 6886.77 cpu seconds
This process generated 4 decoys from 4 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...




1FAB_BOINC_MFR_ABRELAX_2144_24_1_0
-161



]]>

Validate state Invalid
Claimed credit 28.4623439083363
Granted credit 0
application version 5.68


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Thomas Leibold

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Message 3216 - Posted: 24 Jun 2007, 3:02:27 UTC - in response to Message 3215.  

Hi:

We\'re looking at these now..



I got some of those too. Here is what it looks like on the boinc console:

2007-06-23 17:05:39 [ralph@home] Computation for task 1FAB_BOINC_MFR_ABRELAX_2144_38_1 finished
2007-06-23 17:05:39 [ralph@home] Output file 1FAB_BOINC_MFR_ABRELAX_2144_38_1_0 for task 1FAB_BOINC_MFR_ABRELAX_2144_38_1 absent
2007-06-23 17:05:39 [rosetta@home] Resuming task BENCH_051207_ABRELAX_SAVE_ALL_OUT_-1a19A-_BARCODE_R55_filters_1804_1116_0 using rosetta version 568
2007-06-23 17:05:40 [ralph@home] Deferring communication for 2 hr 27 min 5 sec
2007-06-23 17:05:40 [ralph@home] Reason: Unrecoverable error for result 1FAB_BOINC_MFR_ABRELAX_2144_38_1 (<file_xfer_error>
<file_name>1FAB_BOINC_MFR_ABRELAX_2144_38_1_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>
)
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Profile Conan
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Message 3217 - Posted: 24 Jun 2007, 9:06:15 UTC - in response to Message 3207.  

2 Compute error Work Units, completed but failed file transfer, lost 12 hours of processing and get no credit for it.

this WU completed 24 decoys
and this one completed 12 decoys

CPU time 21377.666099
stderr out

<core_client_version>5.8.16</core_client_version>
<![CDATA[
<stderr_txt>
Graphics are disabled due to configuration...
# cpu_run_time_pref: 21600
# random seed: 2605311
======================================================
DONE :: 1 starting structures 21377.7 cpu seconds
This process generated 24 decoys from 24 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1HPR_BOINC_MFR_ABRELAX_2145_32_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

It would be nice if we got credits for the ones that complete but then have a problem uploading, has happened a number of times before.



Another 9 with the same error, all completed but failed file transfer

564201 13 decoys
564038 24 decoys
563680 11 decoys
563601 25 decoys
563273 12 decoys
563240 24 decoys
563951 9 decoys
563766 28 decoys
563609 23 decoys

Total of about 54 hours for no result.

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Message 3218 - Posted: 24 Jun 2007, 11:52:09 UTC

to report 2 WU\'s with following error:

<core_client_version>5.10.7</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 3600
# random seed: 2605148
======================================================
DONE :: 1 starting structures 3151.71 cpu seconds
This process generated 1 decoys from 1 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1IL4_BOINC_MFR_ABRELAX_2148_45_2_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Result ID - 564740, 563618
WorkUnit ID - 499754,499086



I wish I can fly like a bird in the sky
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j2satx

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Message 3221 - Posted: 25 Jun 2007, 2:08:08 UTC

Result ID 564743
Name 1HPR_BOINC_MFR_ABRELAX_2146_19_2
Workunit 499492
Created 24 Jun 2007 7:43:55 UTC
Sent 24 Jun 2007 7:43:59 UTC
Received 24 Jun 2007 16:00:28 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 0 (0x0)
Computer ID 8761
Report deadline 28 Jun 2007 7:43:59 UTC
CPU time 6552.40625
stderr out

<core_client_version>5.10.8</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 7200
# random seed: 2605274
======================================================
DONE :: 1 starting structures 6552.2 cpu seconds
This process generated 7 decoys from 7 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1HPR_BOINC_MFR_ABRELAX_2146_19_2_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid
Claimed credit 26.7637185373818
Granted credit 0
application version 5.68
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j2satx

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Message 3222 - Posted: 25 Jun 2007, 2:08:46 UTC

Result ID 564148
Name SSH1_BOINC_MFR_ABRELAX_2149_50_1
Workunit 499805
Created 23 Jun 2007 20:32:06 UTC
Sent 23 Jun 2007 20:32:12 UTC
Received 23 Jun 2007 22:43:35 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 0 (0x0)
Computer ID 7181
Report deadline 27 Jun 2007 20:32:12 UTC
CPU time 6779.167671
stderr out

<core_client_version>5.10.2</core_client_version>
<![CDATA[
<stderr_txt>
Graphics are disabled due to configuration...
# cpu_run_time_pref: 7200
# random seed: 2605093
======================================================
DONE :: 1 starting structures 6778.17 cpu seconds
This process generated 6 decoys from 6 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>SSH1_BOINC_MFR_ABRELAX_2149_50_1_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid
Claimed credit 14.6974882890008
Granted credit 0
application version 5.68
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j2satx

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Message 3223 - Posted: 25 Jun 2007, 2:09:24 UTC

Result ID 564147
Name 1IL4_BOINC_MFR_ABRELAX_2147_24_2
Workunit 499543
Created 23 Jun 2007 20:32:06 UTC
Sent 23 Jun 2007 20:32:12 UTC
Received 24 Jun 2007 5:58:34 UTC
Server state Over
Outcome Client error
Client state Compute error
Exit status 0 (0x0)
Computer ID 7181
Report deadline 27 Jun 2007 20:32:12 UTC
CPU time 6906.935656
stderr out

<core_client_version>5.10.2</core_client_version>
<![CDATA[
<stderr_txt>
Graphics are disabled due to configuration...
# cpu_run_time_pref: 7200
# random seed: 2605219
======================================================
DONE :: 1 starting structures 6905.52 cpu seconds
This process generated 3 decoys from 3 attempts
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>1IL4_BOINC_MFR_ABRELAX_2147_24_2_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

Validate state Invalid
Claimed credit 14.9744940446306
Granted credit 0
application version 5.68
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Message boards : RALPH@home bug list : Bug reports for 5.66-5.68



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