minirosetta 2.05

Message boards : RALPH@home bug list : minirosetta 2.05

To post messages, you must log in.

Previous · 1 · 2 · 3

AuthorMessage
coturnix

Send message
Joined: 5 Jan 10
Posts: 9
Credit: 196,185
RAC: 0
Message 5097 - Posted: 21 Mar 2010, 8:23:26 UTC

Quite a few placestub_alt_denovo_1zvy_****_ProteinInterfaceDesign_19Mar2010_14558_*** work units report

ERROR: Value of inactive option accessed: -holes:dalphaball
(e.g. placestub_alt_denovo_1zvy_2amh_ProteinInterfaceDesign_19Mar2010_14558_2)
ID: 5097 · Report as offensive    Reply Quote
Evan

Send message
Joined: 23 Dec 07
Posts: 75
Credit: 69,584
RAC: 0
Message 5099 - Posted: 21 Mar 2010, 12:16:09 UTC

validate error for
placestub_alt_denovo_1zvy_2r0j_ProteinInterfaceDesign_19Mar2010_14558_1_0

50% (6 out of 12) of these work units have failed with this error
ID: 5099 · Report as offensive    Reply Quote
Snagletooth

Send message
Joined: 4 May 07
Posts: 67
Credit: 134,427
RAC: 0
Message 5100 - Posted: 21 Mar 2010, 13:51:21 UTC

compute error on my mac: placestub_alt_denovo_1zvy_2quo_ProteinInterfaceDesign_19Mar2010_14558_2_0
ERROR: Value of inactive option accessed: -holes:dalphaball
SIGSEGV: segmentation violation
ID: 5100 · Report as offensive    Reply Quote
Billy

Send message
Joined: 29 Jan 07
Posts: 14
Credit: 7,865
RAC: 0
Message 5101 - Posted: 22 Mar 2010, 3:53:28 UTC

Result 1773378

Got stuck and continued for 4 hours; usually tasks are 1 hour. Error is crash.

Intel Mac OSX 10.4
ID: 5101 · Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 9 Apr 08
Posts: 910
Credit: 1,892,541
RAC: 294
Message 5102 - Posted: 22 Mar 2010, 7:19:36 UTC

As usual, between 80% and 90% of validate error(after a correct run) on placestub_alt_denovo_*
1767609
1767608
1767608
etc

I hope validate errors will resolve with 2.06 version.....
ID: 5102 · Report as offensive    Reply Quote
pwrguru

Send message
Joined: 19 Mar 10
Posts: 1
Credit: 301,909
RAC: 0
Message 5103 - Posted: 22 Mar 2010, 13:05:05 UTC

I am new to this project and I must say that I am far from impressed so far... The bulk of the work units I have run so far have completed fine only to be tagged as VALIDATE ERROR ...How can you justify doing valid work only to have it rejected by the server ??
ID: 5103 · Report as offensive    Reply Quote
Evan

Send message
Joined: 23 Dec 07
Posts: 75
Credit: 69,584
RAC: 0
Message 5104 - Posted: 22 Mar 2010, 14:13:48 UTC - in response to Message 5103.  

This site is designed to find and rectify any problems before the work units are sent to R@H. Don't expect to have all the work units working properly. If they do then it is a bonus!
ID: 5104 · Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 9 Apr 08
Posts: 910
Credit: 1,892,541
RAC: 294
Message 5105 - Posted: 22 Mar 2010, 16:28:13 UTC - in response to Message 5103.  

I am new to this project and I must say that I am far from impressed so far... The bulk of the work units I have run so far have completed fine only to be tagged as VALIDATE ERROR ...How can you justify doing valid work only to have it rejected by the server ??


Well, the "validate error" is a well-known problem.
This is a beta project, so it's normal to have problems with wu
But, i'm agree with you, this problems it's annoying....
ID: 5105 · Report as offensive    Reply Quote
Tonno

Send message
Joined: 23 Nov 06
Posts: 16
Credit: 49,841
RAC: 0
Message 5106 - Posted: 23 Mar 2010, 1:03:02 UTC - in response to Message 5105.  

1774657
1776020
1776022

ERROR: in::file::zip minirosetta_database.zip does not exist!
ERROR:: Exit from: ....srcappspublicboincminirosetta.cc line: 137
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish
ID: 5106 · Report as offensive    Reply Quote
Tonno

Send message
Joined: 23 Nov 06
Posts: 16
Credit: 49,841
RAC: 0
Message 5107 - Posted: 23 Mar 2010, 1:34:12 UTC - in response to Message 5106.  

I checked some validate errors and I found that happens in WUs that has been suspended by the BOINC manager (6.10.36) to let other WUs start.
This is a common problem that I see in the recent versions (6.X). The BOINC manager doesn’t let finish the WU, but suspended it to start another of the same project.
I have 10 RALPH WUs that has been suspended at 60-80% (taking a lot of memory and making the computer to be really slow and the BOINC manager to crash sometimes) and then, when resumed, they finished rapidly and give validate error.
In the other PC with version 5.10.45 of the BOINC manager, I haven't such a problem and no validate error (on a total of 27 WUs).

Someone other can confirm that?
ID: 5107 · Report as offensive    Reply Quote
Profile [VENETO] boboviz

Send message
Joined: 9 Apr 08
Posts: 910
Credit: 1,892,541
RAC: 294
Message 5108 - Posted: 23 Mar 2010, 7:59:51 UTC - in response to Message 5107.  

I have only 6.10.36 clients, but now i download an older version and i try it
ID: 5108 · Report as offensive    Reply Quote
Previous · 1 · 2 · 3

Message boards : RALPH@home bug list : minirosetta 2.05



©2024 University of Washington
http://www.bakerlab.org