RosettaMini Beta 3.24

Author	Message
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5477 - Posted: 14 Mar 2012, 14:11:25 UTC New version is out, boys... ID: 5477 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5478 - Posted: 14 Mar 2012, 20:41:26 UTC 2613022 Starting watchdog... Watchdog active. dof_atom1 atomno= 3 rsd= 1 atom1 atomno= 1 rsd= 1 atom2 atomno= 2 rsd= 1 atom3 atomno= 5 rsd= 1 atom4 atomno= 6 rsd= 1 THETA1 1.#QNAN THETA3 1.#QNAN PHI2 2.14542 ERROR: AtomTree::torsion_angle_dof_id: angle range error ERROR:: Exit from: ......srccorekinematicsAtomTree.cc line: 771 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish ID: 5478 · Reply Quote

Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0	Message 5479 - Posted: 15 Mar 2012, 7:07:22 UTC Had an error on this one2614017 Process exited with code 193 (0xc1, -63) SIGSEGV: segmentation violation Stack trace (18 frames): [0xa858057] [0xf771b400] [0xa55e7bf] [0x9b30785] [0x9b16cff] [0x9b1db00] [0x9d24392] [0x9bd61a9] [0x8a84a27] [0x8a3a683] [0x93c09a0] [0x93c336a] [0x954a627] [0x95b06f5] [0x95adf25] [0x80547ed] [0xa8e7f78] [0x8048131] Conan ID: 5479 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5480 - Posted: 15 Mar 2012, 19:35:45 UTC 2609531 Starting watchdog... Watchdog active. Hbond tripped: [2012- 3-15 11:33:52:] bounds error (radius = -1.#IND, val = -1.#IND), def = SOGFUNC 4 6.401 4.665 0.016 9.375 3.973 0.048 9.521 4.214 0.036 18.3 7.3 0.9 ERROR: Fatal SOGFunc_Impl error. ERROR:: Exit from: ......srccorescoringconstraintsSOGFunc_Impl.cc line: 181 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish </stderr_txt> ID: 5480 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5481 - Posted: 21 Mar 2012, 11:39:27 UTC 2621729 Hbond tripped: [2012- 3-21 12:15:20:] bounds error (radius = -1.#IND, val = -1.#IND), def = SOGFUNC 2 5.84 2.956 0.153 18.3 7.3 0.847 ERROR: Fatal SOGFunc_Impl error. ERROR:: Exit from: ......srccorescoringconstraintsSOGFunc_Impl.cc line: 181 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish ID: 5481 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5485 - Posted: 27 Mar 2012, 10:24:11 UTC 2622618 Setting WU description ... Unpacking zip data: ../../projects/ralph.bakerlab.org/minirosetta_database_rev47790.zip Unpacking WU data ... Unpacking data: ../../projects/ralph.bakerlab.org/test_data.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... Setting up folding (abrelax) ... ERROR: ERROR: FragmentIO: could not open file test_aa0000109_05.200_v1_3 ERROR:: Exit from: ......srccorefragmentFragmentIO.cc line: 233 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish ID: 5485 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5486 - Posted: 27 Mar 2012, 12:05:22 UTC Validate error on 2622620 Starting watchdog... Watchdog active. ====================================================== DONE :: 99 starting structures 2803.54 cpu seconds This process generated 99 decoys from 99 attempts ====================================================== BOINC :: WS_max 1.00688e+008 BOINC :: Watchdog shutting down... BOINC :: BOINC support services shutting down cleanly ... called boinc_finish </stderr_txt> ]]> Validate state Invalid ID: 5486 · Reply Quote

Snagletooth Send message Joined: 4 May 07 Posts: 67 Credit: 134,427 RAC: 0	Message 5487 - Posted: 27 Mar 2012, 12:07:41 UTC test_pose_BB_perturbation_JOBID_SAVE_ALL_OUT_17702_91_0 process exited with code 1 (0x1, -255) ERROR: Cannot open PDB file "pose_BB" ERROR:: Exit from: src/core/import_pose/import_pose.cc line: 184 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish ID: 5487 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5488 - Posted: 27 Mar 2012, 19:46:52 UTC - in response to Message 5485. 2622618 ERROR: ERROR: FragmentIO: could not open file test_aa0000109_05.200_v1_3 ERROR:: Exit from: ......srccorefragmentFragmentIO.cc line: 233 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish Today, bad day. Another wu with same error (on win7) 2624062 And 2624064 with this error ERROR: Cannot open PDB file "pose_BB" ERROR:: Exit from: ......srccoreimport_poseimport_pose.cc line: 184 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish ID: 5488 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5489 - Posted: 31 Mar 2012, 12:04:38 UTC All errors on win 7 (32 and 64 bit): 2625843 2625844 2625845 2625846 ERROR: in::file::boinc_wu_zip design_62_data.zip does not exist! ERROR:: Exit from: ......srcappspublicboincminirosetta.cc line: 162 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish Please, stop this batch ID: 5489 · Reply Quote

Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0	Message 5490 - Posted: 31 Mar 2012, 12:52:39 UTC - in response to Message 5489. All errors on win 7 (32 and 64 bit): 2625843 2625844 2625845 2625846 ERROR: in::file::boinc_wu_zip design_62_data.zip does not exist! ERROR:: Exit from: ......srcappspublicboincminirosetta.cc line: 162 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish Please, stop this batch Same Error on Linux 64 bit, ALL work units Error out. ERROR: in::file::boinc_wu_zip design_62_data.zip does not exist! ERROR:: Exit from: src/apps/public/boinc/minirosetta.cc line: 162 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish See the following Work Units 2626834 2626869 2626908 2626909 2626975 2627013 2627086 Conan ID: 5490 · Reply Quote

Trotador Send message Joined: 7 May 10 Posts: 33 Credit: 14,751,677 RAC: 0	Message 5491 - Posted: 31 Mar 2012, 14:09:56 UTC Same here windows 7 and linux both 64 bits. All crashed with that same error. regards ID: 5491 · Reply Quote

Monty Send message Joined: 21 Feb 12 Posts: 2 Credit: 3,779 RAC: 0	Message 5492 - Posted: 31 Mar 2012, 14:39:58 UTC And here on a Vista Home Premium 32-Bit machine: ERROR: in::file::boinc_wu_zip design_62_data.zip does not exist! ERROR:: Exit from: ......srcappspublicboincminirosetta.cc line: 162 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish ID: 5492 · Reply Quote

Monty Send message Joined: 21 Feb 12 Posts: 2 Credit: 3,779 RAC: 0	Message 5493 - Posted: 31 Mar 2012, 20:40:53 UTC - in response to Message 5492. Here is another type on the same machine: ERROR: Cannot open PDB file "pose_BB" ERROR:: Exit from: ......srccoreimport_poseimport_pose.cc line: 184 BOINC:: Error reading and gzipping output datafile: default.out called boinc_finish ID: 5493 · Reply Quote

TPCBF Send message Joined: 20 Jun 11 Posts: 30 Credit: 27,776 RAC: 0	Message 5494 - Posted: 31 Mar 2012, 21:05:54 UTC - in response to Message 5490. Same Error on Linux 64 bit, ALL work units Error out. ERROR: in::file::boinc_wu_zip design_62_data.zip does not exist! Likewise, getting the same error on all WUs, running Windows XP Pro SP3 32Bit... Ralf ID: 5494 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294	Message 5496 - Posted: 1 Apr 2012, 7:18:45 UTC I repeat: please, stop this batch!! ID: 5496 · Reply Quote

Snagletooth Send message Joined: 4 May 07 Posts: 67 Credit: 134,427 RAC: 0	Message 5497 - Posted: 1 Apr 2012, 12:08:14 UTC t7_fd.c.82-85.i.3-74_abinitio_SAVE_ALL_OUT_17707_xxx All of these are failing immediately on my mac with: ERROR: in::file::boinc_wu_zip design_62_data.zip does not exist! ERROR:: Exit from: src/apps/public/boinc/minirosetta.cc line: 162 ID: 5497 · Reply Quote

TPCBF Send message Joined: 20 Jun 11 Posts: 30 Credit: 27,776 RAC: 0	Message 5498 - Posted: 1 Apr 2012, 20:15:39 UTC - in response to Message 5494. Same Error on Linux 64 bit, ALL work units Error out. ERROR: in::file::boinc_wu_zip design_62_data.zip does not exist! Likewise, getting the same error on all WUs, running Windows XP Pro SP3 32Bit... Ralf Got 4 more of those WUs this morning, same result, all terminated within seconds, with the same error message... :-( Ralf ID: 5498 · Reply Quote

Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0	Message 5499 - Posted: 1 Apr 2012, 23:34:27 UTC Well out of dozens of failures I managed to have just the ONE SUCCESS 2633954 is successful Conan ID: 5499 · Reply Quote

vaughan Send message Joined: 18 Feb 06 Posts: 2 Credit: 521,398 RAC: 30	Message 5500 - Posted: 2 Apr 2012, 9:52:53 UTC WTF is going on. Over the last few days every task running version 3.24 fails in less than 30 seconds. Now some inane message about a limit on the number of tasks is showing up. Hey RALPH that's your fault not mine. Please abort this batch and restore the task quotas ASAP. ID: 5500 · Reply Quote