Rosetta mini beta and/or android 3.61-3.83

Author	Message
Dirk Broer Send message Joined: 7 Aug 14 Posts: 15 Credit: 139,340 RAC: 28	Message 5895 - Posted: 9 Oct 2015, 13:52:23 UTC - in response to Message 5887. There is lots of compute power in RALPH to bug-out any problems that come from using SSE/SSE2 (thought technically there shouldn't be any, since 99% of users are using SSE2 capable CPUs). I would extend that to 99.9% ID: 5895 · Reply Quote

dcdc Send message Joined: 15 Aug 06 Posts: 27 Credit: 90,652 RAC: 0	Message 5896 - Posted: 9 Oct 2015, 14:00:57 UTC - in response to Message 5895. Eliminating an non-SSE2 version of Rosetta would eliminate Pentium 3 and Athlon XP or earlier CPUs, so I'd guess less than 0.1% of output. ID: 5896 · Reply Quote

Trotador Send message Joined: 7 May 10 Posts: 33 Credit: 14,751,677 RAC: 0	Message 5897 - Posted: 9 Oct 2015, 18:34:14 UTC - in response to Message 5894. In Linux libglut.so.3 errors all over the place, perhaps looking in wrong directory? me too :( ID: 5897 · Reply Quote

dekim Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 20 Jan 06 Posts: 250 Credit: 543,579 RAC: 0	Message 5898 - Posted: 9 Oct 2015, 20:32:49 UTC I just updated to 3.64. This includes a fix for libglut. This update includes a bug fix for our patch dock protocol which fixes the output format which was causing validation errors. It also includes support for much smaller fragment files which we will integrate into our pipelines to significantly decrease bandwidth usage. Since this is a full update to the latest Rosetta source, it may also include new protocols and other various updates. I've been too busy to look into optimizations. We do have one volunteer helping us out however. I'll keep you all posted if anything develops. ID: 5898 · Reply Quote

Dr. MerkwÃ¼rdigliebe Send message Joined: 12 Jun 15 Posts: 16 Credit: 23,473 RAC: 0	Message 5899 - Posted: 9 Oct 2015, 21:03:06 UTC - in response to Message 5898. Last modified: 9 Oct 2015, 21:28:21 UTC All of my jobs are failing.... EDIT: ../../projects/ralph.bakerlab.org/minirosetta_beta_3.64_x86_64-pc-linux-gnu: error while loading shared libraries: libGLU.so.1: cannot open shared object file: No such file or directory Oh, for crying out loud, please provide a 64-Bit binary. ID: 5899 · Reply Quote

Dirk Broer Send message Joined: 7 Aug 14 Posts: 15 Credit: 139,340 RAC: 28	Message 5900 - Posted: 9 Oct 2015, 21:27:43 UTC - in response to Message 5896. Last modified: 9 Oct 2015, 21:29:30 UTC Eliminating an non-SSE2 version of Rosetta would eliminate Pentium 3 and Athlon XP or earlier CPUs, so I'd guess less than 0.1% of output. And eliminating an non-SSE3 version of Rosetta would also eliminate Pentium 3, Athlon XP or earlier CPUs plus the very first Athlon64 and Opteron64 CPUs (pre Venice Stepping E3 and San Diego Stepping E4), so I'd guess less than 0.2% of output. ID: 5900 · Reply Quote

dekim Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 20 Jan 06 Posts: 250 Credit: 543,579 RAC: 0	Message 5901 - Posted: 9 Oct 2015, 21:35:31 UTC - in response to Message 5899. I'll test a 64bit linux build. Should come up shortly. ID: 5901 · Reply Quote

Dr. MerkwÃ¼rdigliebe Send message Joined: 12 Jun 15 Posts: 16 Credit: 23,473 RAC: 0	Message 5902 - Posted: 9 Oct 2015, 21:48:42 UTC - in response to Message 5901. I didn't mean to be rude, it's just when you install the 32-Bit version of libglu1-mesa, apt-get will install >50MB worth of 32-Bit libraries as dependencies. That kinda sucks. I installed the libraries but I can't get more jobs from ralph because "Fr 09 Okt 2015 23:45:32 CEST \| ralph@home \| (reached daily quota of 8 results)" ID: 5902 · Reply Quote

dekim Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 20 Jan 06 Posts: 250 Credit: 543,579 RAC: 0	Message 5903 - Posted: 9 Oct 2015, 23:05:33 UTC - in response to Message 5902. I just updated the 64bit linux app. Please let me know how it goes as there might still be compatibility issues with the glut, GL, GLU libraries etc... ID: 5903 · Reply Quote

TPCBF Send message Joined: 20 Jun 11 Posts: 30 Credit: 27,776 RAC: 0	Message 5904 - Posted: 10 Oct 2015, 3:51:15 UTC Got a bunch of WUs today(Beta 3.63, on Windows 8.1/64) and while the first one finished fine, with the rest it seems the "same old same old" starts: They will run for a while, then CPU time will stop increasing, at some point the job still shows "running" but no ETA time (just "-----") until they will crap out with a "Computation error" after blocking anything else on the host for hours, and no credit given either. Again, these are Beta 3.63 WUs, on Windows 8.1/64, 8GB of RAM, BOINC agent v7.6.9... Ralf ID: 5904 · Reply Quote

Trotador Send message Joined: 7 May 10 Posts: 33 Credit: 14,751,677 RAC: 0	Message 5905 - Posted: 10 Oct 2015, 7:49:51 UTC - in response to Message 5903. I just updated the 64bit linux app. Please let me know how it goes as there might still be compatibility issues with the glut, GL, GLU libraries etc... 3.65 is working, great! ID: 5905 · Reply Quote

Dr. MerkwÃ¼rdigliebe Send message Joined: 12 Jun 15 Posts: 16 Credit: 23,473 RAC: 0	Message 5906 - Posted: 10 Oct 2015, 10:54:25 UTC Yeah, looks good. ID: 5906 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 910 Credit: 1,892,541 RAC: 294	Message 5909 - Posted: 12 Oct 2015, 7:35:00 UTC - in response to Message 5906. Yeah, looks good. +1 Ready for rosetta. ID: 5909 · Reply Quote

dekim Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 20 Jan 06 Posts: 250 Credit: 543,579 RAC: 0	Message 5911 - Posted: 12 Oct 2015, 17:50:03 UTC - in response to Message 5904. Got a bunch of WUs today(Beta 3.63, on Windows 8.1/64) and while the first one finished fine, with the rest it seems the "same old same old" starts: They will run for a while, then CPU time will stop increasing, at some point the job still shows "running" but no ETA time (just "-----") until they will crap out with a "Computation error" after blocking anything else on the host for hours, and no credit given either. Again, these are Beta 3.63 WUs, on Windows 8.1/64, 8GB of RAM, BOINC agent v7.6.9... Ralf does resetting the project help? ID: 5911 · Reply Quote

TPCBF Send message Joined: 20 Jun 11 Posts: 30 Credit: 27,776 RAC: 0	Message 5912 - Posted: 12 Oct 2015, 21:45:24 UTC - in response to Message 5911. Got a bunch of WUs today(Beta 3.63, on Windows 8.1/64) and while the first one finished fine, with the rest it seems the "same old same old" starts: They will run for a while, then CPU time will stop increasing, at some point the job still shows "running" but no ETA time (just "-----") until they will crap out with a "Computation error" after blocking anything else on the host for hours, and no credit given either. Again, these are Beta 3.63 WUs, on Windows 8.1/64, 8GB of RAM, BOINC agent v7.6.9... Ralf does resetting the project help? I did not get a chance to do that, at least this time around. In the past, I mentioned this a few times that I had the same issue, but with each batch of WUs, it's the same spiel. Out of a dozen or so beta WUs, taking up days of compute time, blocking other projects, only two WUs finished and got credited. I really don't know if any of the developers are actually paying attention, at least none of them seems to be posting in here... :-( Ralf ID: 5912 · Reply Quote

dcdc Send message Joined: 15 Aug 06 Posts: 27 Credit: 90,652 RAC: 0	Message 5913 - Posted: 12 Oct 2015, 21:51:39 UTC - in response to Message 5912. You just replied to one! ID: 5913 · Reply Quote

Senilix Send message Joined: 25 Apr 13 Posts: 3 Credit: 18,266 RAC: 0	Message 5916 - Posted: 17 Oct 2015, 0:40:36 UTC Nothing but validate errors on the new batch 3.64 T0559_indexed_frags_test_... ID: 5916 · Reply Quote

[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 910 Credit: 1,892,541 RAC: 294	Message 5918 - Posted: 20 Oct 2015, 5:32:44 UTC Why 3.64 if 3.65 is out? ID: 5918 · Reply Quote

Valter Send message Joined: 11 Aug 08 Posts: 3 Credit: 95,627 RAC: 0	Message 5919 - Posted: 20 Oct 2015, 10:13:09 UTC Good morning to all... I have three 3.64 tasks at 100% after more than five hours, but not closing. Remaining time is ---, but they continue running. Please, should I keep them or abort them? Many thanks, Valter. ID: 5919 · Reply Quote

dcdc Send message Joined: 15 Aug 06 Posts: 27 Credit: 90,652 RAC: 0	Message 5920 - Posted: 20 Oct 2015, 10:37:47 UTC - in response to Message 5919. I would exit BOINC and restart it in that situation rather than aborting them. ID: 5920 · Reply Quote