Rosetta mini beta and/or android 3.61-3.83

Message boards : RALPH@home bug list : Rosetta mini beta and/or android 3.61-3.83

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Profile [VENETO] boboviz

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Message 6131 - Posted: 9 Feb 2017, 7:48:35 UTC

All "frx2dock_symmdock" wus are validate errors

# cpu_run_time_pref: 7200
======================================================
DONE :: 600 starting structures 6300.73 cpu seconds
This process generated 600 decoys from 600 attempts
======================================================
BOINC :: WS_max 2.62869e+008

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
called boinc_finish

Validate state Invalid
Claimed credit 51.01861043964704
Granted credit 0
application version 3.73
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Profile [VENETO] boboviz

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Message 6132 - Posted: 9 Feb 2017, 8:56:58 UTC

And, please, 8 mb of upload is too much....
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Yavanius
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Message 6133 - Posted: 10 Feb 2017, 4:35:31 UTC

All WUs are failing on my Moto X 1st Gen...

Doesn't seem to be any error messages. Everything seems to be running just fine according to the log but it failed.

http://ralph.bakerlab.org/results.php?hostid=36838


Also on my Galaxy Tab S2, about half are failing:

http://ralph.bakerlab.org/results.php?hostid=38725

~Y
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Message 6134 - Posted: 16 Feb 2017, 10:04:39 UTC

Now batch for 3.73 wus for windows....
Are we testing 3.77??
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Message 6135 - Posted: 17 Feb 2017, 15:33:49 UTC - in response to Message 6133.  

It seems almost all the 'FAVES' WUs error out and looks toward the end but most of the 'VALL' seem to complete on the 2 android devices previously mentioned.

It seems a # of other devices are having issues with the FAVES too.

Unfortunately, it seemsthe FAVES get served more often. Unless I hear something about addressing the high errors, I'm gonna abort the FAVES and see how the VALL continue to do.
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Message 6138 - Posted: 4 Mar 2017, 8:37:44 UTC - in response to Message 6134.  

Now batch for 3.73 wus for windows....
Are we testing 3.77??


Again, 3.73 for win
Is 3.77 only for android?
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Message 6143 - Posted: 17 Mar 2017, 3:02:13 UTC

I just updated the android app to 3.78. 3.78 is only being tested for android.
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Message 6144 - Posted: 17 Mar 2017, 15:02:24 UTC - in response to Message 6143.  

I just updated the android app to 3.78. 3.78 is only being tested for android.


What's new in this version? Only bugfix??
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Message 6145 - Posted: 17 Mar 2017, 15:52:28 UTC

3.78 uses the latest Rosetta code which has gone through some refactoring, mainly for scripting XML compliance. There are also changes in the cyclic peptide folding protocol. I also finally fixed a bug in the BOINC API which was causing random seg faults on my test device but it looks like there are still some bugs on other android platforms/versions (judging from the few jobs that have already been processed).
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Message 6146 - Posted: 17 Mar 2017, 15:57:12 UTC - in response to Message 6145.  

3.78 uses the latest Rosetta code which has gone through some refactoring, mainly for scripting XML compliance. There are also changes in the cyclic peptide folding protocol. I also finally fixed a bug in the BOINC API which was causing random seg faults on my test device but it looks like there are still some bugs on other android platforms/versions (judging from the few jobs that have already been processed).



Well done.
Do you plan to update the non-android code to test it on pc and not only on smartphone??
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Message 6147 - Posted: 17 Mar 2017, 17:48:25 UTC - in response to Message 6146.  

Eventually when it's necessary, but I'm focusing on android for the moment. The XML changes are not backwards compatible so the next update will likely be under a new app name. However, there hasn't been a significant research related need to update the pc platforms yet.

There are a lot of android users joining our project and there's potential for significantly more in the near future.


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Message 6148 - Posted: 20 Mar 2017, 7:59:43 UTC - in response to Message 6147.  

There are a lot of android users joining our project and there's potential for significantly more in the near future.


You have your reasons, but i continue to consider android tech "marginal" compared to cpus.
Meantime i chrunch with my phone :-)
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Message 6150 - Posted: 28 Mar 2017, 8:24:49 UTC
Last modified: 28 Mar 2017, 8:39:51 UTC

I'm seeing a lot of early errors from the 3.80 android app so I'll probably revert to the previous version after letting it run through the night.

edit: I reverted back to 3.79 as 3.81.
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Message 6152 - Posted: 29 Mar 2017, 23:42:12 UTC
Last modified: 29 Mar 2017, 23:59:11 UTC

I updated the android app to 3.82. I think I managed to work out the major issues.
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Message 6153 - Posted: 30 Mar 2017, 16:03:30 UTC - in response to Message 6152.  

I updated the android app to 3.82. I think I managed to work out the major issues.


No problems here with android 5.1

P.S. Update the title of the thread.... :-)
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Message 6154 - Posted: 1 Apr 2017, 11:13:17 UTC

This wu ends correctly, but has some errors:
WARNING: linker: ../../projects/ralph.bakerlab.org/minirosetta_android_3.83_arm-android-linux-gnu: unused DT entry: type 0x6ffffffe arg 0x2828
WARNING: linker: ../../projects/ralph.bakerlab.org/minirosetta_android_3.83_arm-android-linux-gnu: unused DT entry: type 0x6fffffff arg 0x2
WARNING: linker: ../../projects/ralph.bakerlab.org/minirosetta_android_3.83_arm-android-linux-gnu: unused DT entry: type 0x6ffffffe arg 0x2828
WARNING: linker: ../../projects/ralph.bakerlab.org/minirosetta_android_3.83_arm-android-linux-gnu: unused DT entry: type 0x6fffffff arg 0x2
======================================================
DONE :: 1 starting structures 25707.6 cpu seconds
This process generated 1 decoys from 1 attempts
======================================================
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Message 6155 - Posted: 1 Apr 2017, 18:04:32 UTC - in response to Message 6154.  

Yes, I've noticed these warnings on some devices but can't reproduce them on mine. I'll have to figure out what libraries aren't being used but linked against. Thanks!

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Message 6156 - Posted: 3 Apr 2017, 8:01:06 UTC - in response to Message 6155.  

Yes, I've noticed these warnings on some devices but can't reproduce them on mine.


After 13h of calculations, i've killed this wus
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Message 6157 - Posted: 4 Apr 2017, 5:47:11 UTC

These work units should eventually finish. I suggest not killing them. We'll see if we can reduce the run times for future batches.
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Message 6158 - Posted: 5 Apr 2017, 5:28:23 UTC - in response to Message 6157.  

These work units should eventually finish. I suggest not killing them.


I've another one. 99,1% after 18h.
I hope to take 500 points for this wu :-P
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Message boards : RALPH@home bug list : Rosetta mini beta and/or android 3.61-3.83



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