Message boards : RALPH@home bug list : Rosetta_beta 4.0+
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Mumps [MM] Send message Joined: 10 Mar 15 Posts: 2 Credit: 11,258,633 RAC: 0 |
On my predominantly AMD based fleet, almost all 64 bit 4.07 tasks are ending in error after about 1 minute. All hosts seem to be fine running the 32 bit tasks. The logs report an exit signal of 11, which I believe translates to SIGSEGV, normally an invalid memory reference. It looks like it may be related to a missing/corrupted download, because a rare host does seem to be able to complete tasks run with the 64 bit app, while all seem to be able to do so with the 32 bit app. Any suggestions? Failed: https://ralph.bakerlab.org/result.php?resultid=4264728 Good host: https://ralph.bakerlab.org/result.php?resultid=42645268 |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
4281026 File: C:cygwinhomeboincRosettamainsourcesrccore/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306 chi angle must be between -180 and 180: -nan(ind) |
Trotador Send message Joined: 7 May 10 Posts: 33 Credit: 14,751,677 RAC: 0 |
4281026 Several of those ones as well. |
Trotador Send message Joined: 7 May 10 Posts: 33 Credit: 14,751,677 RAC: 0 |
4281026 A lot of them actually |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
A lot of them actually +1 4281114 4281023 etc.... But I don't know if admins read this thread. |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
Some wus are using over 1gb of ram each |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
Same here. Still getting this error on ALL 32 bit Windows XP tasks, NONE of them work. Same thing happened on the main project, obviously released too early before being fixed here on RALPH. Conan |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
Same here. I am getting the same error still. On both Ralph and Rosetta, for these XP 32 bit tasks, ALL fail. Linux works OK. Conan |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
I am getting the same error still. On both Ralph and Rosetta, for these XP 32 bit tasks, ALL fail. All big sw houses (MS, Apple, a lot of linux distro, etc) are abandoning 32 bits. All big hw producers (Nvidia, AMD, etc) are abandoning 32 bits in their drivers. I think it's time, for boinc projects, to start the death of 32 bits (no debug, no new app, etc) |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
I am getting the same error still. On both Ralph and Rosetta, for these XP 32 bit tasks, ALL fail. That may or may not be the case, however it suits my needs and I don't need 64 bits to do what I do with this computer. Check the application listing, 32 Bit is supposed to work, it does NOT. My question is the "Rosetta Mini" work units run without an issue, on both 32 bit and 64 bit, but the new "Rosetta" work units fail on the 32 bit. So I am asking what has changed to cause the problem. Conan |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
That may or may not be the case, however it suits my needs and I don't need 64 bits to do what I do with this computer. Don't misunderstand me, Conan. I think you're right: you have 32bit system, project supports 32 bit system. But I do not know if they have the strength (or the will) to support XP 32 bit. |
Trotador Send message Joined: 7 May 10 Posts: 33 Credit: 14,751,677 RAC: 0 |
Many units are taking over 1GB RAM (again), I've seen up to 1.6GB |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
4597437 <message> |
Trotador Send message Joined: 7 May 10 Posts: 33 Credit: 14,751,677 RAC: 0 |
Many units are taking over 1GB RAM (again), I've seen up to 1.6GB some examples: https://ralph.bakerlab.org/result.php?resultid=4610974 https://ralph.bakerlab.org/result.php?resultid=4611547 https://ralph.bakerlab.org/result.php?resultid=4610940 https://ralph.bakerlab.org/result.php?resultid=4611488 https://ralph.bakerlab.org/result.php?resultid=4613637 https://ralph.bakerlab.org/result.php?resultid=4613672 https://ralph.bakerlab.org/result.php?resultid=4613678 https://ralph.bakerlab.org/result.php?resultid=4613261 https://ralph.bakerlab.org/result.php?resultid=4616237 https://ralph.bakerlab.org/result.php?resultid=4615718 https://ralph.bakerlab.org/result.php?resultid=4614760 https://ralph.bakerlab.org/result.php?resultid=4614886 https://ralph.bakerlab.org/result.php?resultid=4614837 https://ralph.bakerlab.org/result.php?resultid=4616251 https://ralph.bakerlab.org/result.php?resultid=4616952 https://ralph.bakerlab.org/result.php?resultid=4614243 https://ralph.bakerlab.org/result.php?resultid=4614244 |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
Many units are taking over 1GB RAM (again), I've seen up to 1.6GB Same here. 2 of my computers are "waiting for memory". |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
4597437 A lot of these errors (some after 4hs) https://ralph.bakerlab.org/result.php?resultid=4623903 https://ralph.bakerlab.org/result.php?resultid=4622701 https://ralph.bakerlab.org/result.php?resultid=4623848 etc, etc... |
Trotador Send message Joined: 7 May 10 Posts: 33 Credit: 14,751,677 RAC: 0 |
More errors <core_client_version>7.6.31</core_client_version> <![CDATA[ <message> process got signal 11 </message> <stderr_txt> command: ../../projects/ralph.bakerlab.org/rosetta_4.07_i686-pc-linux-gnu -run:protocol jd2_scripting @flags_rb_04_15_85_134__t000__0_C4_robetta -silent_gz -mute all -out:file:silent default.out -in:file:boinc_wu_zip input_rb_04_15_85_134__t000__0_C4_robetta.zip -nstruct 10000 -cpu_run_time 3600 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2126819 Starting watchdog... Watchdog active. BOINC:: CPU time: 18506.1s, 14400s + 3600s[2018- 4-18 2:40:41:] :: BOINC WARNING! cannot get file size for default.out.gz: could not open file. Output exists: default.out.gz Size: -1 InternalDecoyCount: 0 (GZ) ----- 0 ----- Stream information inconsistent. Writing W_0000001 ====================================================== DONE :: 1 starting structures 18506.1 cpu seconds This process generated 1 decoys from 1 attempts ====================================================== 02:40:41 (20103): called boinc_finish(0) </stderr_txt> ]]> |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
More errors I'm quite skeptical that administrators read the forum.... |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
Same here. This error is still happening on both Ralph and Rosetta with the Rosetta WU. The Rosetta Mini WUs are all OK on both 32 bit Windows XP and on 64 bit Linux. The application listing shows 32 Bit is supposed to work, it does NOT. My question is the "Rosetta Mini" work units run without an issue, on both 32 bit and 64 bit, but the new "Rosetta" work units fail on the 32 bit. So I am asking again, what has changed to cause the problem? Conan |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 913 Credit: 1,892,541 RAC: 294 |
The application listing shows 32 Bit is supposed to work, it does NOT. Seems that no one of admins are interested of your issues..... :-( |
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Rosetta_beta 4.0+
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