Posts by Andrew Leaver-Fay

1) Message boards : RALPH@home bug list : Bug Reports for Rosetta Mini Versions 1.+ (Message 3812) Posted 8 Mar 2008 by Andrew Leaver-Fay Post: Thanks for posting that message, AdeB. Our rotamer library has been producing NaN errors lately. The zero in that list of three values (3 0 3) is clearly the source of the bug. Thanks!
2) Message boards : RALPH@home bug list : Bug reports for Ralph 5.42 and 5.43 (Message 2643) Posted 18 Dec 2006 by Andrew Leaver-Fay Post: Hi Rhiju I've noticed that ralph is running on my mac during the day even when I set my BOINC preferences so that it should only run at night (on a single processor between 6pm and 8am). This is a lot like the problems I've had with boinc before which seemed to disappear when I updated my boinc client following DK's advice. It almost seems it's ralph and not the boinc manager that is the source of the problem; when there were no jobs to run from ralph for a while (and I was running Rosetta@home jobs only) things went smoothly. Ralph is now taking 163% of my processor time (from top -- I have two processors). Top thinks the executables name is "rosetta_be" but clips the name at the "be" -- probably rosetta_beta. The job has been running for 157 hours. I haven't earned any credits for the past week, though. I ran ps -aux and the job looks like: rosetta_beta_5.43_powerpc-apple-darwin xx 1rnb A -output_silent_gz -silent -increase_cycles 10 -new_centroid_packing -pose_abinitio -pose_relax -pose_relax_fragment_moves -out ps clips the command line, so it could have gone on for another page or two. Seems to be a worrying bug: boinc is burning clock cycles, but not dispensing credit. Best, Andrew