Posts by Barraud Denis

1) Message boards : RALPH@home bug list : Bug Reports for Minirosetta v1.36 (Message 4285)
Posted 22 Oct 2008 by Barraud Denis
Post:
the units hombench are seriouly buged, a lot of them have long time cpu workink, with no reward for time the used, I think the watchdog should be turned OFF; or reward these unit more ..


Task ID 1137005
Name hombench_mtyka_looprelax_ccd_close_looprelax_t374__IGNORE_THE_REST_1YVOA_12_5182_1_0
Workunit 1002825
Created 14 Oct 2008 16:30:27 UTC
Sent 16 Oct 2008 22:18:51 UTC
Received 18 Oct 2008 5:05:06 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x0)
Computer ID 12276
Report deadline 20 Oct 2008 22:18:51 UTC
CPU time 21089.7
stderr out

<core_client_version>6.3.14</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 21600
# cpu_run_time_pref: 21600
======================================================
DONE :: 1 starting structures 21088.6 cpu seconds
This process generated 42 decoys from 42 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...
called boinc_finish

</stderr_txt>
]]>

Validate state Invalid
Claimed credit 92.2812617237414
Granted credit 0
application version 1.36
2) Message boards : RALPH@home bug list : bug in t042_1_NMRREF_ (Message 4235)
Posted 4 Oct 2008 by Barraud Denis
Post:
The error in my last 2 wu :
t042_1_NMRREF_1_t015_1_S_00001_0000163IGNORE_THE_REST_040000_5067_2_1
t042_1_NMRREF_1_t015_1_S_00001_0000163IGNORE_THE_REST_040000_5068_18_1
....
if seem to be :

ERROR: Unable to open file: worksramanminirosetta_databasechemical/residue_type_sets/fa_standard/residue_types.txt

ERROR:: Exit from: ....srccorechemicalResidueTypeSet.cc line: 86

---> a file name can't have / in remplace it by , this explain why the file can't be open ... Verifiy all source file, just in case the same error appear somewhere else.
3) Message boards : RALPH@home bug list : Rosetta min 1.03 (Message 3607)
Posted 14 Jan 2008 by Barraud Denis
Post:
This program is probablely bugged, when these wu start the boinc manager freeze, and dont work . the 2 process of boinc stay in memory, they start calculate and stop imediately the wus. No possibility to use the boinc manager completely blocked And no work are donne.

The only solution i found to recover boinc is :
to kill the 2 process boinc in task manager of XP, and
to modify the file client_stat.xml to add in the <project> section of ralph and rosetta project after <send_job_log>0</send_job_log>
the line <suspended_via_gui/>
to stop the project.

The right will be to stop rosetta mini 1.03 wu, or wait to new version 1.04.






©2024 University of Washington
http://www.bakerlab.org