Posts by ChertseyAl

1) Message boards : RALPH@home bug list : Minirosetta 1.67 (Message 4823)
Posted 17 May 2009 by Profile ChertseyAl
Post:
Quite a few compute errors (about 10%), both XP and Linux, all error -161:

frb_0_8_mike_chosen_cst_mergefrag_hb_t293__IGNORE_THE_REST_1NV8A_16_9981_1
http://ralph.bakerlab.org/workunit.php?wuid=1288232
http://ralph.bakerlab.org/result.php?resultid=1453676
XP

gen2_direct_frag_cst_filt5_hb_t305__IGNORE_THE_REST_2AHSA_6_9896_1
http://ralph.bakerlab.org/workunit.php?wuid=1283845
http://ralph.bakerlab.org/result.php?resultid=1449190
XP

gen2_seqrelax_200_cst_hb_t305__IGNORE_THE_REST_2AHSA_2_9836_1
http://ralph.bakerlab.org/workunit.php?wuid=1282082
http://ralph.bakerlab.org/result.php?resultid=1447381
Linux

gen2_direct_frag_cst_hb_t305__IGNORE_THE_REST_1RPMA_5_9816_1
http://ralph.bakerlab.org/workunit.php?wuid=1281311
http://ralph.bakerlab.org/result.php?resultid=1446587
XP

gen2_direct_frag_cst_hb_t305__IGNORE_THE_REST_1YFOA_4_9816_1
http://ralph.bakerlab.org/workunit.php?wuid=1281305
http://ralph.bakerlab.org/result.php?resultid=1446581
XP

frb_0_8_mike_chosen_cst_9mer_hb_t305__IGNORE_THE_REST_1RPMA_4_9736_1
http://ralph.bakerlab.org/workunit.php?wuid=1278259
http://ralph.bakerlab.org/result.php?resultid=1444761
XP

Al.


2) Message boards : RALPH@home bug list : Bug Reports for Minirosetta v1.39 (Message 4327)
Posted 31 Oct 2008 by Profile ChertseyAl
Post:
This WU took ages to run:

http://ralph.bakerlab.org/workunit.php?wuid=1035623
http://ralph.bakerlab.org/result.php?resultid=1174535

I have my prefs set to 1 hour WUs, and generally WUs take between 40 minutes and three hours.

This one seemed to nearly complete, but the last few percent took the bulk of the CPU time.

Also, seems to have granted very little credit for the time use: Claimed 80.05, granted 14.59 - Not worried about the credit, but it's almost as if the task completed, then restarted?


<snippage>
recovering checkpoint of tag S_00000001 with id stage4_kk_1
recovering checkpoint of tag S_00000001 with id stage4_kk_2
recovering checkpoint of tag S_00000001 with id stage4_kk_3
recovering checkpoint of tag S_00000001 with id abrelax_relax
======================================================
DONE :: 1 starting structures 16112 cpu seconds
This process generated 1 decoys from 1 attempts
======================================================

BOINC :: Watchdog shutting down...
recovering checkpoint of tag S_00000001 with id abrelax_rg_state
recovering checkpoint of tag S_00000001 with id stage_1
recovering checkpoint of tag S_00000001 with id stage_2
recovering checkpoint of tag S_00000001 with id stage_3_iter1_1
<snippage>
recovering checkpoint of tag S_00000001 with id stage4_kk_2
recovering checkpoint of tag S_00000001 with id stage4_kk_3
recovering checkpoint of tag S_00000001 with id abrelax_relax
======================================================
DONE :: 1 starting structures 36444.4 cpu seconds
This process generated 1 decoys from 1 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...
called boinc_finish


XP Pro, 32 bit FWIW.



Al.


3) Message boards : RALPH@home bug list : Bug report for Minirosetta version 1.29 (Message 4155)
Posted 3 Jul 2008 by Profile ChertseyAl
Post:
Please post any bugs/issues here regarding minirosetta version 1.29.


Don't know if you are interested in these, but I had a few of them over night. Here's a sample one:

03/07/2008 10:43:28|ralph@home|Starting 1pgx__ABRELAX_PREDFRAG_SAVE_ALL_OUT-1pgx_-_4605_4_1
03/07/2008 10:43:34|ralph@home|Starting task 1pgx__ABRELAX_PREDFRAG_SAVE_ALL_OUT-1pgx_-_4605_4_1 using minirosetta version 129
03/07/2008 10:43:36|ralph@home|Computation for task 1pgx__ABRELAX_PREDFRAG_SAVE_ALL_OUT-1pgx_-_4605_4_1 finished
03/07/2008 10:43:36|ralph@home|Output file 1pgx__ABRELAX_PREDFRAG_SAVE_ALL_OUT-1pgx_-_4605_4_1_0 for task 1pgx__ABRELAX_PREDFRAG_SAVE_ALL_OUT-1pgx_-_4605_4_1 absent

http://ralph.bakerlab.org/workunit.php?wuid=928656
http://ralph.bakerlab.org/result.php?resultid=1050853

Al.






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