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RoseTTAFold All-Atom 0.03 (nvidia_alpha)
(Message 7804)
Posted 17 days ago by ![]() Post: my tasks page shows that i have 3 tasks in progress, but BOINC on the computer shows only one. Nothing in transfersSounds like what's known as Ghost Tasks. Thank you I think you are right - i had some networking issues yesterday due to work on some other project.. Those 2 extra tasks still hang In Progress and will time out in few days |
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RoseTTAFold All-Atom 0.03 (nvidia_alpha)
(Message 7802)
Posted 18 days ago by ![]() Post: something strange is going with the tasks my tasks page shows that i have 3 tasks in progress, but BOINC on the computer shows only one. Nothing in transfers i definitely have all tasks visible, not only active... will research logs carefully tomorrow. did anyone see such issue ? |
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RoseTTAFold All-Atom 0.03 (nvidia_alpha)
(Message 7790)
Posted 20 days ago by ![]() Post: I got 6 units of the latest batch and all errored out after 4 seconds because of an access code violation. Same fate for my wingmen. Windows 10, RTX 4080, 32 GB RAM. Anybody who managed to finish off a bunch of them care to share your system details? i completed all 20 tasks from last batch win 10 64; RTX 3060 i had folding@home in parallel |
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RoseTTAFold All-Atom 0.03 (nvidia_alpha)
(Message 7786)
Posted 22 days ago by ![]() Post: because this is a alpha/beta project i think it is useful if it reports all the time tech details of what work is available |
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RoseTTAFold All-Atom 0.03 (nvidia_alpha)
(Message 7775)
Posted 23 days ago by ![]() Post: This time task worked fine! on RTX 3060 with Folding@home in parallel, Completed and validated runtime 2,246.30 cpu time 166.20 credits 185.19 |
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RoseTTAFold All-Atom 0.03 (nvidia_alpha)
(Message 7773)
Posted 23 days ago by ![]() Post: I've got one more task - so far it crunches fine for 15 mins.. |
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RoseTTAFold All-Atom 0.03 (nvidia_alpha)
(Message 7751)
Posted 21 Jun 2024 by ![]() Post: All 25 allowed for the day tasks failed with the same error for me ... |
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RoseTTAFold All-Atom 0.03 (nvidia_alpha)
(Message 7749)
Posted 21 Jun 2024 by ![]() Post: new task https://ralph.bakerlab.org/result.php?resultid=5469367 failed after few mins <core_client_version>8.0.2</core_client_version> <![CDATA[ <message> The access code is invalid. (0xc) - exit code 12 (0xc)</message> <stderr_txt> C:ProgramDataBOINCprojectsralph.bakerlab.orgcv2rf2aautil.py:450: UserWarning: Using torch.cross without specifying the dim arg is deprecated. Please either pass the dim explicitly or simply use torch.linalg.cross. The default value of dim will change to agree with that of linalg.cross in a future release. (Triggered internally at C:cbpytorch_1000000000000workatensrcATennativeCross.cpp:66.) Z = torch.cross(Xn,Yn) usage: predict.py [-h] [-checkpoint CHECKPOINT] [-pdb PDB] [-silent SILENT] [-tmpl_chain TMPL_CHAIN] [-tmpl_conf TMPL_CONF] [-movescale MOVESCALE] [-n_pred N_PRED] [-n_cycle N_CYCLE] [-no_extra_l1] [-no_atom_frames] [-outcsv OUTCSV] predict.py: error: unrecognized arguments: -z .venv_j_pred_alpha_92.zip </stderr_txt> ]]> |
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RoseTTAFold All-Atom 0.02 (env)
(Message 7747)
Posted 21 Jun 2024 by ![]() Post: New app was released and there are new tasks 0.03 (nvidia_alpha) |
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RoseTTAFold All-Atom 0.02 (env)
(Message 7720)
Posted 19 Jun 2024 by ![]() Post: Target computation time is set at 1 hour. i'd suggest to use a HWiNFO64 or MSI Afterburner to measure if it really is using GPU.. Btw why it runs 4 tasks ? It is only possible if your machine has 4 GPUS, otherwise it would require custom app config to make it run in parallel ... |
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RoseTTAFold All-Atom 0.02 (env)
(Message 7717)
Posted 19 Jun 2024 by ![]() Post: Did anyone finish a new task successfully ? |
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RoseTTAFold All-Atom 0.02 (env)
(Message 7707)
Posted 19 Jun 2024 by ![]() Post: One of my computers was able to download several of these tasks, and after about 3 hours of CPU time, the estimated remaining time was 15-20 minutes. what target computation time do you have in the preferences? i have set 30 mins and it still failed after 25m for me… |
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RoseTTAFold All-Atom 0.02 (env)
(Message 7703)
Posted 18 Jun 2024 by ![]() Post: I only switched to RTX 3060 yesterday (for Folding) and accidentally noticed it crunches Ralph tasks I just noticed, the 7 tasks that i successfully completed on Jun 15-16 were also nvidia app. At that time i had Nvidia NVS 310 (very old graphics card) on this computer and it worked fine without memory requirements I dont want to waste GPU time for tasks that all fail so i will try to run one more task tomorrow if there will be any |
14)
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RoseTTAFold All-Atom 0.02 (env)
(Message 7702)
Posted 18 Jun 2024 by ![]() Post: Updating BOINC to 8.0.2 did not help Yes i have RTX 3060 with 12GB ram - so i dont receive such error msg Task crunches for ~25 mins and then fails |
15)
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RoseTTAFold All-Atom 0.02 (env)
(Message 7700)
Posted 18 Jun 2024 by ![]() Post: Updating BOINC to 8.0.2 did not help The task fails with Exit status 197 (0x000000C5) EXIT_TIME_LIMIT_EXCEEDED after 25 mins I have a setting to run tasks 1 day in preferences ... |
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RoseTTAFold All-Atom 0.02 (env)
(Message 7699)
Posted 18 Jun 2024 by ![]() Post: Generalized biomolecular modeling and design with RoseTTAFold All-Atom 0.02 (nvidia_alpha) I've got few of these Currently crunching 1st task - it always stays at 100% - few already failed after half hour I updated BOINC to 8.0.2, to see if this helps task to process <core_client_version>8.0.0</core_client_version> <![CDATA[ <message> exceeded elapsed time limit 1594.21 (100000000.00G/62727.08G)</message> <stderr_txt> Unhandled Exception Detected... - Unhandled Exception Record - Reason: Breakpoint Encountered (0x80000003) at address 0x00007FFED3C5AFA2 Engaging BOINC Windows Runtime Debugger... ******************** BOINC Windows Runtime Debugger Version 7.9.0 Dump Timestamp : 06/18/24 10:16:53 Install Directory : C:Program FilesBOINC Data Directory : C:ProgramDataBOINC Project Symstore : https://boinc.bakerlab.org/rosetta/symstore LoadLibraryA( C:ProgramDataBOINCdbghelp.dll ): GetLastError = 126 Loaded Library : dbghelp.dll LoadLibraryA( C:ProgramDataBOINCsymsrv.dll ): GetLastError = 126 LoadLibraryA( symsrv.dll ): GetLastError = 126 LoadLibraryA( C:ProgramDataBOINCsrcsrv.dll ): GetLastError = 126 LoadLibraryA( srcsrv.dll ): GetLastError = 126 LoadLibraryA( C:ProgramDataBOINCversion.dll ): GetLastError = 126 Loaded Library : version.dll Debugger Engine : 4.0.5.0 Symbol Search Path: C:ProgramDataBOINCslots13;C:ProgramDataBOINCprojectsralph.bakerlab.org;srv*C:ProgramDataBOINCprojectsralph.bakerlab.orgsymbols*http://msdl.microsoft.com/download/symbols;srv*C:ProgramDataBOINCprojectsralph.bakerlab.orgsymbols*https://boinc.bakerlab.org/rosetta/symstore ModLoad: 0000000040000000 000000000013f000 C:ProgramDataBOINCprojectsralph.bakerlab.orgw_0.02_windows_x86_64.exe (-nosymbols- Symbols Loaded) Linked PDB Filename : C:UsersUsersourcereposConsoleApplication1x64ReleaseConsoleApplication1.pdb ModLoad: 00000000d5e30000 00000000001f8000 C:windowsSYSTEM32ntdll.dll (6.2.19041.4522) (-exported- Symbols Loaded) Linked PDB Filename : ntdll.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 ModLoad: 00000000d3e90000 00000000000bd000 C:windowsSystem32KERNEL32.DLL (6.2.19041.3636) (-exported- Symbols Loaded) Linked PDB Filename : kernel32.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 ModLoad: 00000000d3b70000 00000000002f6000 C:windowsSystem32KERNELBASE.dll (6.2.19041.4522) (-exported- Symbols Loaded) Linked PDB Filename : kernelbase.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 ModLoad: 00000000d4330000 000000000019f000 C:windowsSystem32USER32.dll (6.2.19041.4474) (-exported- Symbols Loaded) Linked PDB Filename : user32.pdb File Version : 10.0.19041.1 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.1 ModLoad: 00000000d35a0000 0000000000022000 C:windowsSystem32win32u.dll (6.2.19041.4529) (-exported- Symbols Loaded) Linked PDB Filename : win32u.pdb File Version : 10.0.19041.4529 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.4529 ModLoad: 00000000d5800000 000000000002b000 C:windowsSystem32GDI32.dll (6.2.19041.4474) (-exported- Symbols Loaded) Linked PDB Filename : gdi32.pdb File Version : 10.0.19041.4474 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.4474 ModLoad: 00000000d3660000 0000000000117000 C:windowsSystem32gdi32full.dll (6.2.19041.4474) (-exported- Symbols Loaded) Linked PDB Filename : gdi32full.pdb File Version : 10.0.19041.4474 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.4474 ModLoad: 00000000d3820000 000000000009d000 C:windowsSystem32msvcp_win.dll (6.2.19041.3636) (-exported- Symbols Loaded) Linked PDB Filename : msvcp_win.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 ModLoad: 00000000d3a70000 0000000000100000 C:windowsSystem32ucrtbase.dll (6.2.19041.3636) (-exported- Symbols Loaded) Linked PDB Filename : ucrtbase.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 ModLoad: 00000000d4160000 00000000000b0000 C:windowsSystem32ADVAPI32.dll (6.2.19041.4522) (-exported- Symbols Loaded) Linked PDB Filename : advapi32.pdb File Version : 10.0.19041.1 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.1 ModLoad: 00000000d4290000 000000000009e000 C:windowsSystem32msvcrt.dll (7.0.19041.3636) (-exported- Symbols Loaded) Linked PDB Filename : msvcrt.pdb File Version : 7.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 7.0.19041.3636 ModLoad: 00000000d4a20000 00000000000a0000 C:windowsSystem32sechost.dll (6.2.19041.4522) (-exported- Symbols Loaded) Linked PDB Filename : sechost.pdb File Version : 10.0.19041.1 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.1 ModLoad: 00000000d56d0000 0000000000123000 C:windowsSystem32RPCRT4.dll (6.2.19041.4355) (-exported- Symbols Loaded) Linked PDB Filename : rpcrt4.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 ModLoad: 00000000d37f0000 0000000000027000 C:windowsSystem32bcrypt.dll (6.2.19041.3636) (-exported- Symbols Loaded) Linked PDB Filename : bcrypt.pdb File Version : 10.0.19041.1 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.1 ModLoad: 00000000d5830000 000000000002f000 C:windowsSystem32IMM32.DLL (6.2.19041.4474) (-exported- Symbols Loaded) Linked PDB Filename : imm32.pdb File Version : 10.0.19041.4474 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.4474 ModLoad: 00000000d1390000 0000000000012000 C:windowsSYSTEM32kernel.appcore.dll (6.2.19041.3758) (-exported- Symbols Loaded) Linked PDB Filename : Kernel.Appcore.pdb File Version : 10.0.19041.3758 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3758 ModLoad: 00000000c8310000 00000000001e4000 C:windowsSYSTEM32dbghelp.dll (6.2.19041.3636) (-exported- Symbols Loaded) Linked PDB Filename : dbghelp.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 ModLoad: 00000000cd1e0000 000000000000a000 C:windowsSYSTEM32version.dll (6.2.19041.3636) (-exported- Symbols Loaded) Linked PDB Filename : version.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 ModLoad: 00000000d35d0000 0000000000082000 C:windowsSystem32bcryptPrimitives.dll (6.2.19041.3636) (-exported- Symbols Loaded) Linked PDB Filename : bcryptprimitives.pdb File Version : 10.0.19041.3636 (WinBuild.160101.0800) Company Name : Microsoft Corporation Product Name : Microsoft® Windows® Operating System Product Version : 10.0.19041.3636 *** Dump of the Process Statistics: *** - I/O Operations Counters - Read: 6, Write: 185, Other 91 - I/O Transfers Counters - Read: 18454, Write: 194, Other 9532 - Paged Pool Usage - QuotaPagedPoolUsage: 90264, QuotaPeakPagedPoolUsage: 90440 QuotaNonPagedPoolUsage: 6520, QuotaPeakNonPagedPoolUsage: 7472 - Virtual Memory Usage - VirtualSize: 2031616, PeakVirtualSize: 83140608 - Pagefile Usage - PagefileUsage: 2031616, PeakPagefileUsage: 2031616 - Working Set Size - WorkingSetSize: 5619712, PeakWorkingSetSize: 5623808, PageFaultCount: 1499 *** Dump of thread ID 3956 (state: Waiting): *** - Information - Status: Wait Reason: UserRequest, , Kernel Time: 156250.000000, User Time: 0.000000, Wait Time: 4363216.000000 - Unhandled Exception Record - Reason: Breakpoint Encountered (0x80000003) at address 0x00007FFED3C5AFA2 - Registers - rax=0000000000000000 rbx=0000000000000001 rcx=0000000040099c58 rdx=000000000231eb80 rsi=0000000000000000 rdi=0000000000000000 r8=000000000231eb80 r9=0000000040099c48 r10=0000000000000fff r11=0000000000000ff0 r12=0000000000000000 r13=0000000000000000 r14=0000000000000000 r15=0000000000000000 rip=00000000d3c5afa2 rsp=000000000231eb58 rbp=0000000000000000 cs=0033 ss=002b ds=002b es=002b fs=0053 gs=002b efl=00000246 - Callstack - ChildEBP RetAddr Args to Child 0231eb50 40041010 00000001 0231eb80 0231eb80 40099c48 KERNELBASE!DebugBreak+0x0 0231ef90 40041b74 32000000 0231f2f3 00000000 00000154 w_0.02_windows_x86_64!+0x0 0231fef0 40041f14 00000000 00000000 00000000 00000000 w_0.02_windows_x86_64!+0x0 0231ff20 d3ea7344 00000000 00000000 00000000 00000000 w_0.02_windows_x86_64!+0x0 0231ff50 d5e7cc91 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0 0231ffd0 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0 *** Dump of thread ID 4796 (state: Waiting): *** - Information - Status: Wait Reason: UserRequest, , Kernel Time: 0.000000, User Time: 0.000000, Wait Time: 4261127.000000 - Registers - rax=0000000000000004 rbx=0000000000000000 rcx=0000000000000130 rdx=0000000000000000 rsi=0000000000000000 rdi=0000000000000130 r8=0000000000564ba0 r9=00000000000000ab r10=000000000000002d r11=00000000000000ab r12=0000000000000000 r13=0000000000000000 r14=0000000000000130 r15=0000000000000000 rip=00000000d5ecd5e4 rsp=000000000013b518 rbp=000000000013b679 cs=0033 ss=002b ds=0000 es=0000 fs=0000 gs=0000 efl=00000246 - Callstack - ChildEBP RetAddr Args to Child 0013b510 d3b91c4e 00000000 d3bcb900 00000000 00000000 ntdll!ZwWaitForSingleObject+0x0 0013b5b0 4006a010 00000130 ffffffff 00000000 00000130 KERNELBASE!WaitForSingleObjectEx+0x0 0013b6d0 40069ddd 00000000 00000000 ffffffff 00000000 w_0.02_windows_x86_64!+0x0 0013b730 4004be8b 00000000 00000000 0013b7a0 00567700 w_0.02_windows_x86_64!+0x0 0013b7a0 40003e04 0056dde0 00000031 00567c00 0013b8b0 w_0.02_windows_x86_64!+0x0 0014fee0 400447b0 00567570 00000000 00559300 00000000 w_0.02_windows_x86_64!+0x0 0014ff20 d3ea7344 00000000 00000000 00000000 00000000 w_0.02_windows_x86_64!+0x0 0014ff50 d5e7cc91 00000000 00000000 00000000 00000000 KERNEL32!BaseThreadInitThunk+0x0 0014ffd0 00000000 00000000 00000000 00000000 00000000 ntdll!RtlUserThreadStart+0x0 *** Debug Message Dump **** *** Foreground Window Data *** Window Name : Window Class : Window Process ID: 0 Window Thread ID : 0 Exiting... </stderr_txt> ]]> |
17)
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RoseTTAFold All-Atom
(Message 7667)
Posted 15 Jun 2024 by ![]() Post: i ve got <core_client_version>7.24.1</core_client_version> <![CDATA[ <message> The access code is invalid. (0xc) - exit code 12 (0xc)</message> <stderr_txt> 'C:Program' is not recognized as an internal or external command, operable program or batch file. </stderr_txt> ]]> but few WUs validated fine |
18)
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RoseTTAFold All-Atom
(Message 7526)
Posted 5 Jun 2024 by ![]() Post: Same <core_client_version>7.24.1</core_client_version> <![CDATA[ <message> The access code is invalid. (0xc) - exit code 12 (0xc)</message> <stderr_txt> [venv_b_pred_alpha_209.zip] End-of-central-directory signature not found. Either this file is not a zipfile, or it constitutes one disk of a multi-part archive. In the latter case the central directory and zipfile comment will be found on the last disk(s) of this archive. unzip: cannot find zipfile directory in venv_b_pred_alpha_209.zip, and cannot find venv_b_pred_alpha_209.zip.zip, period. </stderr_txt> ]]> <core_client_version>8.0.0</core_client_version> <![CDATA[ <message> - exit code 12 (0xc)</message> <stderr_txt> [venv_b_pred_alpha_74.zip] End-of-central-directory signature not found. Either this file is not a zipfile, or it constitutes one disk of a multi-part archive. In the latter case the central directory and zipfile comment will be found on the last disk(s) of this archive. unzip: cannot find zipfile directory in venv_b_pred_alpha_74.zip, and cannot find venv_b_pred_alpha_74.zip.zip, period. </stderr_txt> ]]> |
19)
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MiniRosetta Beta 3.26
(Message 5529)
Posted 16 May 2012 by ![]() Post: ERROR: Cannot open PDB file "/work/brunette/experiments/alignment_challenge/raptor_difficult_cases/T0540/native//T0540.pdb" ERROR:: Exit from: src/core/import_pose/import_pose.cc line: 184 BOINC:: Error reading and gzipping output datafile: default.out some brunette poses are invalid :D http://ralph.bakerlab.org/result.php?resultid=2658197 on a side note, i think error ins in file path format with double slashes here //T0540.pdb |
20)
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Cafe RALPH :
GEN_ADMIN_EMAIL
(Message 4604)
Posted 29 Jan 2009 by ![]() Post: The team found transfer option has been disabled due to users abusing this feature. what is this email? ps: team Ukraine |
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