Posts by Jipsu

21) Message boards : RALPH@home bug list : Bug Reports for Rosetta Mini Versions 1.+ (Message 3864)
Posted 9 Apr 2008 by Jipsu
Post:
<core_client_version>5.10.45</core_client_version>
<![CDATA[
<stderr_txt>
======================================================
DONE :: 1 starting structures 3075.03 cpu seconds
This process generated 3 decoys from 3 attempts
======================================================

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...
called boinc_finish

</stderr_txt>
<message>
<file_xfer_error>
<file_name>bench80_mini_score13_abrelax_natfrag_1pohA_3475_8_0_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>

WU

MiniRosetta v1.1 Windows XP SP2
22) Message boards : RALPH@home bug list : Bug reports for 5.96 (Message 3863)
Posted 9 Apr 2008 by Jipsu
Post:
And second one, this gives Validate error

<core_client_version>5.10.45</core_client_version>
<![CDATA[
<stderr_txt>
# cpu_run_time_pref: 3600
# random seed: 1417853
# cpu_run_time_pref: 3600
======================================================
DONE :: 1 starting structures 3083.61 cpu seconds
This process generated 3 decoys from 3 attempts
0 starting pdbs were skipped
======================================================


BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down...

</stderr_txt>
<message>
<file_xfer_error>
<file_name>BAK1b0o_loop_model_auto2_3457_40_1_0</file_name>
<error_code>-161</error_code>
</file_xfer_error>

</message>
]]>
23) Message boards : RALPH@home bug list : Bug reports for 5.96 (Message 3862)
Posted 9 Apr 2008 by Jipsu
Post:
WU failed with error code

<core_client_version>5.10.45</core_client_version>
<![CDATA[
<message>
Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
# cpu_run_time_pref: ERROR:: Exit from: 3600.jumping_pairings.cc
line: 1287

</stderr_txt>
]]>

Windows XP SP2

Also got this same error with another XP SP2 computer WU
24) Message boards : RALPH@home bug list : Bug Reports for Rosetta Mini Versions 1.+ (Message 3850)
Posted 8 Apr 2008 by Jipsu
Post:
My windows machines are crunching just fine so it must be some error in linux application
25) Message boards : RALPH@home bug list : Bug Reports for Rosetta Mini Versions 1.+ (Message 3846)
Posted 8 Apr 2008 by Jipsu
Post:
<core_client_version>5.10.28</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>
<stderr_txt>
End-of-central-directory signature not found. Either this file is not
a zipfile, or it constitutes one disk of a multi-part archive. In the
latter case the central directory and zipfile comment will be found on
the last disk(s) of this archive.
unzip: cannot find zipfile directory in one of minirosetta_database_rev20940.zip or
minirosetta_database_rev20940.zip.zip, and cannot find minirosetta_database_rev20940.zip.ZIP, period.

ERROR: Unable to open file: minirosetta_database/chemical/residue_type_sets/fa_standard/residue_types.txt

ERROR:: Exit from: src/core/chemical/ResidueTypeSet.cc line: 85
called boinc_finish

</stderr_txt>
]]>


I'm getting this for every Rosetta mini 1.10 WU on my Linux 2.6.24-gentoo-r4
26) Message boards : RALPH@home bug list : Bug Reports for Rosetta Mini Versions 1.+ (Message 3830)
Posted 18 Mar 2008 by Jipsu
Post:
One 1.09 WU failed

<core_client_version>5.10.28</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1, -255)
</message>
<stderr_txt>
ERROR: Unique best command line context option match not found for -weights

</stderr_txt>
]]>

Using gentoo linux 2.6.24-gentoo-r3

http://ralph.bakerlab.org/result.php?resultid=834298


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