Posts by [VENETO] boboviz

1) Message boards : Number crunching : Ralph and SSEx (Message 6577)
Posted 15 days ago by Profile [VENETO] boboviz
Post:
Interesting slides from DHPCC++ 2018
Visual Studio Code is at 1.25 version
2) Message boards : Number crunching : Ralph support OpenCL ? (Message 6576)
Posted 15 days ago by Profile [VENETO] boboviz
Post:
ROCm is now at 1.8.1 version, with full support to Tensor.
HIP is at 1.5 version, with a lot of new features.
3) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6572)
Posted 13 Jun 2018 by Profile [VENETO] boboviz
Post:
4858014
4857997

std::cerr: Exception was thrown:
File: C:\cygwin\home\boinc\Rosetta\main\source\src\core/pack/dunbrack/SingleResidueDunbrackLibrary.hh:306
chi angle must be between -180 and 180: -nan(ind)[/quote]
4) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6571)
Posted 28 May 2018 by Profile [VENETO] boboviz
Post:
We try to help these people but if they don't take action on what we report then the results will be poor.
So just trying to help the Project, as I have been doing since the test project was launched.


I was amazed how few people work on ralph@h/rosetta@h.
Only 3 persons: 2 servers admins and 1 developer/debugger/code maintainer.
To this situation we have to add the heterogeneous code of rosetta.....and the problems start!!
5) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6569)
Posted 26 May 2018 by Profile [VENETO] boboviz
Post:
And others (4852300, 4852284, etc) with these errors:

<message>
(unknown error) - exit code -1073741819 (0xc0000005)</message>

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x0045C0E8 write attempt to address 0x306F712C


- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x0147C0E8 write attempt to address 0x312C612C


- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x00000000
6) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6568)
Posted 26 May 2018 by Profile [VENETO] boboviz
Post:

Some wus (4840262-4843208-etc) on Win10 64:
ERROR: HybridizeFoldtreeDynamic: failed to build fold tree from cuts and jumps
ERROR:: Exit from: ..\..\..\src\protocols\hybridization\HybridizeFoldtreeDynamic.cc line: 676
BOINC:: Error reading and gzipping output datafile: default.out


Well, a lot of...
7) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6566)
Posted 25 May 2018 by Profile [VENETO] boboviz
Post:
http://ralph.bakerlab.org/result.php?resultid=4837014
ERROR: HybridizeFoldtreeDynamic: failed to build fold tree from cuts and jumps

64-bit Windows
Microsoft Windows 10 Pro
10.0.17134 Build 17134


+1
Some wus (4840262-4843208-etc) on Win10 64:
ERROR: HybridizeFoldtreeDynamic: failed to build fold tree from cuts and jumps
ERROR:: Exit from: ..\..\..\src\protocols\hybridization\HybridizeFoldtreeDynamic.cc line: 676
BOINC:: Error reading and gzipping output datafile: default.out
8) Message boards : Number crunching : Ralph support OpenCL ? (Message 6564)
Posted 25 May 2018 by Profile [VENETO] boboviz
Post:
Other interesting news:
Khronos Group releases SYCL 1.2.1


And Codeplay releases new version of ComputeCpp to be compliant with new SYCL
9) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6562)
Posted 24 May 2018 by Profile [VENETO] boboviz
Post:
Just had 19 failures on an Linux 64 bit machine with this Error Process got signal 11


Different error for me on some wus (under Win10)
<message>
(unknown error) - exit code -1073741819 (0xc0000005)</message>
<stderr_txt>
command: projects/ralph.bakerlab.org/rosetta_4.07_windows_x86_64.exe -run:protocol jd2_scripting -frag_weight_aligned 0.20 -max_registry_shift 6 @flags_T0531s1_pt__t000__1_C3_robetta -silent_gz -mute all -out:file:silent default.out -in:file:boinc_wu_zip input_T0531s1_pt__t000__0_C3_robetta.zip -nstruct 10000 -cpu_run_time 3600 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1909519
Starting watchdog...
Watchdog active.


Unhandled Exception Detected...

- Unhandled Exception Record -
Reason: Access Violation (0xc0000005) at address 0x0000000000000000
10) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6560)
Posted 23 May 2018 by Profile [VENETO] boboviz
Post:
There was a post on the 24/4/18 saying they were going to look into the 32 bit failure rate issue, but nothing has happened and my work units still fail on 32 bit (only the Rosetta ones, the Rosetta Mini ones are fine).


Uh, now i see that post. But i think the only one who can resolve your problem about 32 bit is Dekim (developer and debugger of the project).
P.S. I referred to dekim when i wrote "december 2017"
11) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6558)
Posted 23 May 2018 by Profile [VENETO] boboviz
Post:
I have helped this project since it started but at this pay rate I rather help someone else.

Admin please take a look into this please.


The latest admin post was at the beginning of December 2017, so i don't know how often they read the forum :-(
12) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6556)
Posted 22 May 2018 by Profile [VENETO] boboviz
Post:
Something has chamged with this latest batch of work units, only getting 10% to 12% of the normal credit, just 29 credits for 6 hours work.


That's strange. For my 2h wus i receive from 75 to 130 credits....
13) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6553)
Posted 21 May 2018 by Profile [VENETO] boboviz
Post:
Screensaver crashes in this batch.
But wu seems to be ok, validated.
14) Message boards : Number crunching : Ralph support OpenCL ? (Message 6552)
Posted 17 May 2018 by Profile [VENETO] boboviz
Post:
Kronos Group released OpenCl 2.2 Maintenance Update
15) Message boards : Number crunching : Ralph and SSEx (Message 6551)
Posted 7 May 2018 by Profile [VENETO] boboviz
Post:
GCC 8.1 ready to be public
AOCC 1.2 (Amd Optimizing Compiler for C/C++)
C++17 is ISO standard.
16) Message boards : Number crunching : Ralph support OpenCL ? (Message 6550)
Posted 7 May 2018 by Profile [VENETO] boboviz
Post:
PyOpenCL is at 2018.1 version
Intel moves NEO to OpenCl 2.1
New version of Rocm 1.7.2
SPIR-V to LLVM bi-directional translator
17) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6548)
Posted 28 Apr 2018 by Profile [VENETO] boboviz
Post:
New app seems to be good on my S6..



Today all errors...

<message>
process exited with code 255 (0xff, -1)
</message>
<stderr_txt>
command: ../../projects/ralph.bakerlab.org/rosetta_android_beta_4.10_arm-android-linux-gnu @9res_cis_hydrophobic_nmethyl_c.10.2_0001.flags -nstruct 10000 -cpu_run_time 3600 -watchdog -boinc:max_nstruct 600 -checkpoint_interval 120 -mute all -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 1940326


File: src/utility/options/OptionCollection.cc:239
ERROR:

File: src/utility/options/OptionCollection.cc:443
ERROR:

File: src/utility/options/OptionCollection.cc:1324
Option matching -cyclic_peptide:n_methyl_positions not found in command line top-level context

</stderr_txt>
18) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6547)
Posted 26 Apr 2018 by Profile [VENETO] boboviz
Post:
New app seems to be good on my S6..
19) Message boards : RALPH@home bug list : Rosetta_beta 4.0+ (Message 6542)
Posted 23 Apr 2018 by Profile [VENETO] boboviz
Post:
The application listing shows 32 Bit is supposed to work, it does NOT.

My question is the "Rosetta Mini" work units run without an issue, on both 32 bit and 64 bit, but the new "Rosetta" work units fail on the 32 bit. So I am asking again, what has changed to cause the problem?

Conan


Seems that no one of admins are interested of your issues..... :-(
20) Message boards : RALPH@home bug list : AMD Ryzen and Rosetta (Message 6540)
Posted 20 Apr 2018 by Profile [VENETO] boboviz
Post:
Ryzen 2nd generation is here.
Hope that rosetta will have no problems with.


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