Task 3996727

Name ab_12_01__vall_2011_1tenA_vall_2011_9mers_3mers_20564_108_0
Workunit 3519686
Created 23 Jan 2017, 19:30:29 UTC
Sent 27 Jan 2017, 3:30:47 UTC
Report deadline 29 Jan 2017, 3:30:47 UTC
Received 27 Jan 2017, 12:00:44 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 11 (0x0000000B) Unknown error code
Computer ID 35990
Run time
CPU time 7 hours 42 min 15 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 0.00 GFLOPS
Application version ---

Stderr output

<core_client_version>7.4.43</core_client_version>
<![CDATA[
<message>
process got signal 11
</message>
<stderr_txt>
[2017- 1-27  4:58:51:] :: BOINC:: Initializing ... ok.
[2017- 1-27  4:58:51:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.77_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1tenA.pdb -in::file::fasta ab_12_01__vall_2011__1tenA.fasta -psipred_ss2 ab_12_01__vall_2011__1tenA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1tenA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1tenA.200.3mers.index -fragA ab_12_01__vall_2011__1tenA.200.9mers.index -fragB ab_12_01__vall_2011__1tenA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704517
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Unpacking zip data: ../../projects/ralph.bakerlab.org/minirosetta_database_0cb8dc1_A.zip
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
# cpu_run_time_pref: 28800
Starting work on structure: _00001
Starting work on structure: _00002
Starting work on structure: _00003
Starting work on structure: _00004
Starting work on structure: _00005
Starting work on structure: _00006
Starting work on structure: _00007
Starting work on structure: _00008
Starting work on structure: _00009
Starting work on structure: _00010
Starting work on structure: _00011
Starting work on structure: _00012
Starting work on structure: _00013
Starting work on structure: _00014
Starting work on structure: _00015
Starting work on structure: _00016
Starting work on structure: _00017
Starting work on structure: _00018
Starting work on structure: _00019
Starting work on structure: _00020
Starting work on structure: _00021
Starting work on structure: _00022
Starting work on structure: _00023
Starting work on structure: _00024
======================================================
DONE ::     1 starting structures  27735.2 cpu seconds
This process generated     24 decoys from      24 attempts
======================================================
BOINC :: WS_max 1.09662e+08

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
12:59:09 (16383): called boinc_finish(0)
Invalid address 0xb0cb2e40 passed to free: value not allocated

</stderr_txt>
]]>




©2024 University of Washington
http://www.bakerlab.org