Task 4021443

Name ab_12_01__vall_2011_1iibA_vall_2011_9mers_3mers_20564_204_0
Workunit 3539371
Created 27 Feb 2017, 17:54:01 UTC
Sent 27 Feb 2017, 22:22:02 UTC
Report deadline 1 Mar 2017, 22:22:02 UTC
Received 28 Feb 2017, 5:31:42 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 11 (0x0000000B) Unknown error code
Computer ID 38663
Run time
CPU time 58 min 4 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 0.00 GFLOPS
Application version ---

Stderr output

<core_client_version>7.4.53</core_client_version>
<![CDATA[
<message>
process got signal 11
</message>
<stderr_txt>
[2017- 2-28 15:26: 2:] :: BOINC:: Initializing ... ok.
[2017- 2-28 15:26: 2:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.77_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1iibA.pdb -in::file::fasta ab_12_01__vall_2011__1iibA.fasta -psipred_ss2 ab_12_01__vall_2011__1iibA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1iibA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1iibA.200.3mers.index -fragA ab_12_01__vall_2011__1iibA.200.9mers.index -fragB ab_12_01__vall_2011__1iibA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2705021
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Initializing options.... ok 
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Loaded options.... ok 
Processed options.... ok 
Initializing random generators... ok 
Initialization complete. 
Unpacking zip data: ../../projects/ralph.bakerlab.org/minirosetta_database_0cb8dc1_A.zip
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting watchdog...
Watchdog active.
Starting work on structure: _00001
======================================================
DONE ::     1 starting structures  3484.17 cpu seconds
This process generated      1 decoys from       1 attempts
======================================================
BOINC :: WS_max 2.39243e+08

BOINC :: Watchdog shutting down...
BOINC :: BOINC support services shutting down cleanly ...
16:30:20 (10289): called boinc_finish(0)
Invalid address 0xf0f9de40 passed to free: value not allocated

</stderr_txt>
]]>




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