Task 4041711

Name ab_12_01__vall_2011_2chfA_vall_2011_9mers_3mers_20564_283_1
Workunit 3556938
Created 27 Mar 2017, 18:12:58 UTC
Sent 28 Mar 2017, 3:56:24 UTC
Report deadline 30 Mar 2017, 3:56:24 UTC
Received 30 Mar 2017, 6:11:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 39292
Run time
CPU time 2 hours 42 min 17 sec
Validate state Valid
Credit 13.44
Device peak FLOPS 0.00 GFLOPS
Application version ---

Stderr output

<core_client_version>7.4.53</core_client_version>
<![CDATA[
<stderr_txt>
ding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
[2017- 3-29 11: 2:38:] :: BOINC:: Initializing ... ok.
[2017- 3-29 11: 2:38:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
[2017- 3-29 11:47:49:] :: BOINC:: Initializing ... ok.
[2017- 3-29 11:47:49:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 12:35: 5:] :: BOINC:: Initializing ... ok.
[2017- 3-29 12:35: 5:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 12:36:30:] :: BOINC:: Initializing ... ok.
[2017- 3-29 12:36:30:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 12:37:21:] :: BOINC:: Initializing ... ok.
[2017- 3-29 12:37:21:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 12:39:23:] :: BOINC:: Initializing ... ok.
[2017- 3-29 12:39:24:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 12:40:16:] :: BOINC:: Initializing ... ok.
[2017- 3-29 12:40:16:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 12:42:13:] :: BOINC:: Initializing ... ok.
[2017- 3-29 12:42:13:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 12:43: 5:] :: BOINC:: Initializing ... ok.
[2017- 3-29 12:43: 5:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 12:46: 1:] :: BOINC:: Initializing ... ok.
[2017- 3-29 12:46: 1:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
[2017- 3-29 13:12:53:] :: BOINC:: Initializing ... ok.
[2017- 3-29 13:12:53:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 13:15:35:] :: BOINC:: Initializing ... ok.
[2017- 3-29 13:15:35:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
[2017- 3-29 13:48:39:] :: BOINC:: Initializing ... ok.
[2017- 3-29 13:48:39:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 13:51:43:] :: BOINC:: Initializing ... ok.
[2017- 3-29 13:51:43:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk1_fa ... success! 
[2017- 3-29 15:17:26:] :: BOINC:: Initializing ... ok.
[2017- 3-29 15:17:26:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 16:59: 8:] :: BOINC:: Initializing ... ok.
[2017- 3-29 16:59: 8:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 17: 2:59:] :: BOINC:: Initializing ... ok.
[2017- 3-29 17: 2:59:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 17: 6:54:] :: BOINC:: Initializing ... ok.
[2017- 3-29 17: 6:54:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 17: 7: 4:] :: BOINC:: Initializing ... ok.
[2017- 3-29 17: 7: 4:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 17:17:30:] :: BOINC:: Initializing ... ok.
[2017- 3-29 17:17:30:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 18:26:42:] :: BOINC:: Initializing ... ok.
[2017- 3-29 18:26:42:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 19: 3: 4:] :: BOINC:: Initializing ... ok.
[2017- 3-29 19: 3: 4:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 19:29:12:] :: BOINC:: Initializing ... ok.
[2017- 3-29 19:29:12:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
[2017- 3-29 22:54:34:] :: BOINC:: Initializing ... ok.
[2017- 3-29 22:54:34:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 22:59:16:] :: BOINC:: Initializing ... ok.
[2017- 3-29 22:59:16:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
[2017- 3-29 23:39:39:] :: BOINC:: Initializing ... ok.
[2017- 3-29 23:39:39:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-29 23:42:49:] :: BOINC:: Initializing ... ok.
[2017- 3-29 23:42:49:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
[2017- 3-30  0:11: 7:] :: BOINC:: Initializing ... ok.
[2017- 3-30  0:11: 7:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
[2017- 3-30  0:37:14:] :: BOINC:: Initializing ... ok.
[2017- 3-30  0:37:14:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-30  0:37:44:] :: BOINC:: Initializing ... ok.
[2017- 3-30  0:37:44:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-30  0:40:27:] :: BOINC:: Initializing ... ok.
[2017- 3-30  0:40:27:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
[2017- 3-30  0:43:31:] :: BOINC:: Initializing ... ok.
[2017- 3-30  0:43:31:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
[2017- 3-30  1:12:36:] :: BOINC:: Initializing ... ok.
[2017- 3-30  1:12:36:] :: BOINC :: boinc_init()
BOINC:: Worker initialized successfully. 
Fixing ambiguous flag -use_filters to -abinitio::use_filters
command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.79_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__2chfA.pdb -in::file::fasta ab_12_01__vall_2011__2chfA.fasta -psipred_ss2 ab_12_01__vall_2011__2chfA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__2chfA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__2chfA.200.3mers.index -fragA ab_12_01__vall_2011__2chfA.200.9mers.index -fragB ab_12_01__vall_2011__2chfA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2703542
Registering options.. 
Registered extra options.
Initializing broker options ...
Registered extra options.
Initializing core...
Options::initialize()
Options::adding_options()
Options::initialize() Check specs.
Options::initialize()  End reached
Using previously extracted minirosetta_database.
Setting database description ...
Setting up checkpointing ...
Setting up folding (abrelax) ...
Beginning folding (abrelax) ... 
BOINC:: Worker startup. 
Starting work on structure: _00001
Continuing computation from checkpoint: chk_S_00000001_Abrelax__rg_state ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_4 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_5 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_6 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_7 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_8 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_9 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage_3_iter1_10 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_1 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_2 ... success! 
Continuing computation from checkpoint: chk_S_00000001_ClassicAbinitio__stage4_kk_3 ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk1_fa ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk2_fa ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk3_fa ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk4_fa ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk5_fa ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk6_fa ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk7_fa ... success! 
Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk8_fa ... success! 
======================================================
DONE ::     1 starting structures  9737.51 cpu seconds
This process generated      1 decoys from       1 attempts
======================================================
BOINC :: WS_max 0
BOINC :: BOINC support services shutting down cleanly ...
02:10:36 (18930): called boinc_finish(0)

</stderr_txt>
]]>




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http://www.bakerlab.org