Task 4042804
| Name | ab_12_01__vall_2011_1pgxA_vall_2011_9mers_3mers_20564_300_1 |
| Workunit | 3558070 |
| Created | 29 Mar 2017, 12:19:03 UTC |
| Sent | 29 Mar 2017, 18:01:03 UTC |
| Report deadline | 31 Mar 2017, 18:01:03 UTC |
| Received | 30 Mar 2017, 11:12:57 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 35990 |
| Run time | |
| CPU time | 7 hours 50 min 3 sec |
| Validate state | Valid |
| Credit | 82.71 |
| Device peak FLOPS | 0.00 GFLOPS |
| Application version | --- |
Stderr output
<core_client_version>7.4.53</core_client_version> <![CDATA[ <stderr_txt> ckpoint: chk_S_00000001_FastRelax__chk5_fa ... success! Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk6_fa ... success! Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk7_fa ... success! Continuing computation from checkpoint: chk_S_00000001_FastRelax__chk8_fa ... success! # cpu_run_time_pref: 28800 Starting work on structure: _00002 Starting work on structure: _00003 Starting work on structure: _00004 Starting work on structure: _00005 Starting work on structure: _00006 Starting work on structure: _00007 Starting work on structure: _00008 Starting work on structure: _00009 Starting work on structure: _00010 Starting work on structure: _00011 [2017- 3-30 4:32:45:] :: BOINC:: Initializing ... ok. [2017- 3-30 4:32:45:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. # cpu_run_time_pref: 28800 Starting work on structure: _00011 Starting work on structure: _00012 Starting work on structure: _00013 [2017- 3-30 6: 7:54:] :: BOINC:: Initializing ... ok. [2017- 3-30 6: 7:54:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 6: 8:33:] :: BOINC:: Initializing ... ok. [2017- 3-30 6: 8:33:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. # cpu_run_time_pref: 28800 Starting work on structure: _00013 Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_1 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_2 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_1 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_2 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_3 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_4 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_5 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_6 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_7 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_8 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_9 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage_3_iter1_10 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage4_kk_1 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage4_kk_2 ... success! Continuing computation from checkpoint: chk_S_00000013_ClassicAbinitio__stage4_kk_3 ... success! Continuing computation from checkpoint: chk_S_00000013_FastRelax__chk1_fa ... success! Continuing computation from checkpoint: chk_S_00000013_FastRelax__chk2_fa ... success! Continuing computation from checkpoint: chk_S_00000013_FastRelax__chk3_fa ... success! Continuing computation from checkpoint: chk_S_00000013_FastRelax__chk4_fa ... success! Starting work on structure: _00014 Starting work on structure: _00015 Starting work on structure: _00016 Starting work on structure: _00017 [2017- 3-30 8: 5:10:] :: BOINC:: Initializing ... ok. [2017- 3-30 8: 5:10:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 8: 5:49:] :: BOINC:: Initializing ... ok. [2017- 3-30 8: 5:49:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 8: 6:27:] :: BOINC:: Initializing ... ok. [2017- 3-30 8: 6:27:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 8:39:58:] :: BOINC:: Initializing ... ok. [2017- 3-30 8:39:58:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 8:51:37:] :: BOINC:: Initializing ... ok. [2017- 3-30 8:51:37:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 8:52:16:] :: BOINC:: Initializing ... ok. [2017- 3-30 8:52:16:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 8:52:55:] :: BOINC:: Initializing ... ok. [2017- 3-30 8:52:55:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:10:47:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:10:48:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:11:26:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:11:26:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:12: 6:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:12: 6:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:16:36:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:16:36:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:27:39:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:27:39:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:28:19:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:28:19:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:29: 1:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:29: 1:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:29:36:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:29:36:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:39: 1:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:39: 1:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:42:36:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:42:36:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:46:32:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:46:32:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:52:32:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:52:32:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:53:11:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:53:11:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:53:51:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:53:51:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 9:54:30:] :: BOINC:: Initializing ... ok. [2017- 3-30 9:54:30:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:14:28:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:14:28:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:22:35:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:22:35:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:23:15:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:23:15:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:23:50:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:23:50:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:27:33:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:27:33:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:47:36:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:47:36:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:48:16:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:48:16:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:48:57:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:48:57:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 10:49:35:] :: BOINC:: Initializing ... ok. [2017- 3-30 10:49:35:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 11:38:36:] :: BOINC:: Initializing ... ok. [2017- 3-30 11:38:36:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 11:42: 7:] :: BOINC:: Initializing ... ok. [2017- 3-30 11:42: 7:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 11:54:44:] :: BOINC:: Initializing ... ok. [2017- 3-30 11:54:44:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 12: 6:10:] :: BOINC:: Initializing ... ok. [2017- 3-30 12: 6:10:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 12: 6:50:] :: BOINC:: Initializing ... ok. [2017- 3-30 12: 6:50:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 12: 7:26:] :: BOINC:: Initializing ... ok. [2017- 3-30 12: 7:26:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 12:15:57:] :: BOINC:: Initializing ... ok. [2017- 3-30 12:15:57:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 12:16:36:] :: BOINC:: Initializing ... ok. [2017- 3-30 12:16:36:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 12:17:17:] :: BOINC:: Initializing ... ok. [2017- 3-30 12:17:17:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... [2017- 3-30 12:17:53:] :: BOINC:: Initializing ... ok. [2017- 3-30 12:17:53:] :: BOINC :: boinc_init() BOINC:: Worker initialized successfully. Fixing ambiguous flag -use_filters to -abinitio::use_filters command: ../../projects/ralph.bakerlab.org/minirosetta_android_3.81_arm-android-linux-gnu -abinitio::use_filters true -silent_gz -mute all -abinitio::fastrelax -abinitio::rg_reweight 0.5 -abinitio::rsd_wt_helix 0.5 -abinitio::rsd_wt_loop 0.5 -in:file:native ab_12_01__vall_2011__1pgxA.pdb -in::file::fasta ab_12_01__vall_2011__1pgxA.fasta -psipred_ss2 ab_12_01__vall_2011__1pgxA.psipred_ss2 -kill_hairpins ab_12_01__vall_2011__1pgxA.nobuformat.psipred_ss2 -frag3 ab_12_01__vall_2011__1pgxA.200.3mers.index -fragA ab_12_01__vall_2011__1pgxA.200.9mers.index -fragB ab_12_01__vall_2011__1pgxA.200.3mers.index -nstruct 10000 -cpu_run_time 3600 -boinc:max_nstruct 600 -checkpoint_interval 120 -database minirosetta_database -in::file::zip minirosetta_database.zip -boinc::watchdog -run::rng mt19937 -constant_seed -jran 2704625 Registering options.. Registered extra options. Initializing broker options ... Registered extra options. Initializing core... Options::initialize() Options::adding_options() Options::initialize() Check specs. Options::initialize() End reached Using previously extracted minirosetta_database. Setting database description ... Setting up checkpointing ... Setting up folding (abrelax) ... Beginning folding (abrelax) ... BOINC:: Worker startup. # cpu_run_time_pref: 28800 ====================================================== DONE :: 1 starting structures 28202 cpu seconds This process generated 16 decoys from 16 attempts ====================================================== BOINC :: WS_max 0 BOINC :: BOINC support services shutting down cleanly ... 13:08:24 (31393): called boinc_finish(0) </stderr_txt> ]]>
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