Task 5456215

Name RF_SAVE_ALL_OUT_NOJRAN_IGNORE_THE_REST_validation_env_f_pred_33_16902_1_0
Workunit 4846764
Created 12 Jun 2024, 23:54:50 UTC
Sent 13 Jun 2024, 0:35:17 UTC
Report deadline 14 Jun 2024, 0:35:17 UTC
Received 14 Jun 2024, 6:08:31 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 0 (0x00000000)
Computer ID 42489
Run time 19 hours 59 min 50 sec
CPU time
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.06 GFLOPS
Application version Generalized biomolecular modeling and design with RoseTTAFold All-Atom v0.02 (nvidia_alpha)
windows_x86_64
Peak working set size 2,098.00 MB
Peak swap size 6,344.98 MB
Peak disk usage 6.58 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
Traceback (most recent call last):
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 708, in <module>
    pred.predict(out_name+f'_{n}', 
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 551, in predict
    logit_s, logit_aa_s, logit_pae, logit_pde, p_bind, pred_crds, alpha, pred_allatom, pred_lddt_binned,                msa_prev, pair_prev, state_prev = self.model(
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\RoseTTAFoldModel.py", line 358, in forward
    msa, pair, xyz, alpha_s, xyz_allatom, state, symmsub = self.simulator(
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 1106, in forward
    msa, pair, xyz, state, alpha, symmsub = self.main_block[i_m](msa, pair,
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 929, in forward
    xyz, state, alpha = self.str2str(
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\cuda\amp\autocast_mode.py", line 141, in decorate_autocast
    return func(*args, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 478, in forward
    rbf_feat = rbf(torch.cdist(cas, cas))
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\util_module.py", line 91, in rbf
    RBF = torch.exp(-((D_expand - D_mu) / D_sigma)**2)
RuntimeError: [enforce fail at ..\c10\core\CPUAllocator.cpp:79] data. DefaultCPUAllocator: not enough memory: you tried to allocate 16777216 bytes.
22:33:57 (9380): called boinc_finish(0)

</stderr_txt>
<message>
upload failure: <file_xfer_error>
  <file_name>RF_SAVE_ALL_OUT_NOJRAN_IGNORE_THE_REST_validation_env_f_pred_33_16902_1_0_r180143479_0</file_name>
  <error_code>-240 (stat() failed)</error_code>
</file_xfer_error>
</message>
]]>




©2024 University of Washington
http://www.bakerlab.org