Task 5456322

Name RF_SAVE_ALL_OUT_NOJRAN_IGNORE_THE_REST_validation_env_f_pred_40_16902_5_0
Workunit 4846871
Created 12 Jun 2024, 23:55:15 UTC
Sent 13 Jun 2024, 0:35:17 UTC
Report deadline 14 Jun 2024, 0:35:17 UTC
Received 14 Jun 2024, 6:08:31 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 0 (0x00000000)
Computer ID 42489
Run time 1 days 3 hours 57 min 27 sec
CPU time
Validate state Invalid
Credit 0.00
Device peak FLOPS 4.06 GFLOPS
Application version Generalized biomolecular modeling and design with RoseTTAFold All-Atom v0.02 (nvidia_alpha)
windows_x86_64
Peak working set size 2,064.14 MB
Peak swap size 6,266.00 MB
Peak disk usage 8.03 MB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
Traceback (most recent call last):
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 708, in <module>
    pred.predict(out_name+f'_{n}', 
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\predict.py", line 551, in predict
    logit_s, logit_aa_s, logit_pae, logit_pde, p_bind, pred_crds, alpha, pred_allatom, pred_lddt_binned,                msa_prev, pair_prev, state_prev = self.model(
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\RoseTTAFoldModel.py", line 358, in forward
    msa, pair, xyz, alpha_s, xyz_allatom, state, symmsub = self.simulator(
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 1106, in forward
    msa, pair, xyz, state, alpha, symmsub = self.main_block[i_m](msa, pair,
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 927, in forward
    pair = self.pair2pair(pair, rbf_feat, state, crop)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\Track_module.py", line 365, in forward
    pair = pair + self.drop_row(self.tri_mul_out(pair)) 
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\cv2\rf2aa\Attention_module.py", line 399, in forward
    out = self.norm_out(out)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\module.py", line 1051, in _call_impl
    return forward_call(*input, **kwargs)
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\modules\normalization.py", line 173, in forward
    return F.layer_norm(
  File "C:\ProgramData\BOINC\projects\ralph.bakerlab.org\ev0\lib\site-packages\torch\nn\functional.py", line 2346, in layer_norm
    return torch.layer_norm(input, normalized_shape, weight, bias, eps, torch.backends.cudnn.enabled)
RuntimeError: [enforce fail at ..\c10\core\CPUAllocator.cpp:79] data. DefaultCPUAllocator: not enough memory: you tried to allocate 8454272 bytes.
22:33:57 (5432): called boinc_finish(0)

</stderr_txt>
<message>
upload failure: <file_xfer_error>
  <file_name>RF_SAVE_ALL_OUT_NOJRAN_IGNORE_THE_REST_validation_env_f_pred_40_16902_5_0_r1265425325_0</file_name>
  <error_code>-240 (stat() failed)</error_code>
</file_xfer_error>
</message>
]]>




©2024 University of Washington
http://www.bakerlab.org