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Bug Report for Ralph 5.27

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Message boards : RALPH@home bug list : Bug Report for Ralph 5.27

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Chu
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Message 2295 - Posted 27 Sep 2006 21:11:45 UTC

    Ralph has been updated to 5.27. In this version, we fixed a problem in the 5.26 of reporting percentage of progess correctly for the docking application. Also, several new flags are added for full atom relax application.

    computerguy09

    Joined: Feb 16 06
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    Message 2296 - Posted 28 Sep 2006 0:29:00 UTC - in response to Message 2295.

      Ralph has been updated to 5.27. In this version, we fixed a problem in the 5.26 of reporting percentage of progess correctly for the docking application. Also, several new flags are added for full atom relax application.


      OK, isn\'t my client supposed to upgrade versions automagically? I didn\'t think much of it when the app went to 5.26, but now that we\'ve gone to 5.27, and my Linux client hasn\'t auto updated.

      And no, I don\'t have any custom xml keeping it at 5.25.

      Suggestions??
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      Rhiju
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      Message 2297 - Posted 28 Sep 2006 1:53:55 UTC - in response to Message 2296.

        Hi computerguy99, that\'s a good question. I think your boinc manager picked up a bunch of workunits before both the updates and is still crunching through them. When your computer is ready for new work, it should get the new application along with it. If you want, you can abort your current workunits -- then you can test out some of the new kinds of modes that we\'re trying!

        Ralph has been updated to 5.27. In this version, we fixed a problem in the 5.26 of reporting percentage of progess correctly for the docking application. Also, several new flags are added for full atom relax application.


        OK, isn\'t my client supposed to upgrade versions automagically? I didn\'t think much of it when the app went to 5.26, but now that we\'ve gone to 5.27, and my Linux client hasn\'t auto updated.

        And no, I don\'t have any custom xml keeping it at 5.25.

        Suggestions??


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        Norman_RKN

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        Message 2299 - Posted 29 Sep 2006 7:16:15 UTC

          Unzul�ssige Funktion. (0x1) - exit code 1 (0x1)
          </message>
          <stderr_txt>
          Couldn\'t find file /work/rhiju/virus/1qgtA/1QGT-chain-A-vq.pdb for reading in dummy model.
          ERROR:: Exit at: .\\dummy_model.cc line:368


          http://ralph.bakerlab.org/result.php?resultid=273952
          http://ralph.bakerlab.org/result.php?resultid=273951
          http://ralph.bakerlab.org/result.php?resultid=273950
          http://ralph.bakerlab.org/result.php?resultid=273949
          http://ralph.bakerlab.org/result.php?resultid=273948
          http://ralph.bakerlab.org/result.php?resultid=273947
          http://ralph.bakerlab.org/result.php?resultid=273946
          etc. etc.

          are the WU´s damaged ?
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          Message 2301 - Posted 29 Sep 2006 17:17:59 UTC

            Last modified: 29 Sep 2006 17:04:09 UTC

            I got a Client/Computing error on WorkUnit ID 243651, result ID 273553 from today.

            1qgtA_BOINC_ABINITIO_SAVE_ALL_OUT_CRYOEM_hom001__1318_1

            Biba - Inais.

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            Rhiju
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            Message 2302 - Posted 30 Sep 2006 0:45:37 UTC - in response to Message 2301.

              Last modified: 30 Sep 2006 0:31:03 UTC

              Hi: there were problems with that batch of workunits. I\'ll fix it and send it out again!


              I got a Client/Computing error on WorkUnit ID 243651, result ID 273553 from today.

              1qgtA_BOINC_ABINITIO_SAVE_ALL_OUT_CRYOEM_hom001__1318_1

              Biba - Inais.


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              Jerry Camden

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              Message 2303 - Posted 30 Sep 2006 16:08:14 UTC

                Last modified: 30 Sep 2006 16:10:52 UTC

                I\'m not sure if this is a client or WU problem. But WUID 241813 has now been running for over 24 hours. It has shown as 100% complete for at least the last 14 hours. I\'m aborting it.

                <Edit>
                I had to close Boinc to get the Ralph client to end. Boinc showed it had switched to a Seti@home task but task manager showed Ralph 5.27 was still running at 90+% cpu.
                When I restarted Boinc, it logged the following error...
                9/30/2006 11:22:59 AM||Data directory: C:\\Program Files\\BOINC
                9/30/2006 11:22:59 AM|ralph@home|State file error: result DOCK_1EFU_unbound_perturb_benchmark_1315_10_1 is in wrong state
                9/30/2006 11:22:59 AM||Processor: 1 AuthenticAMD AMD Athlon(tm) XP 2000+

                </edit>


                This PC is running Boinc 5.6.4 on Win2K.

                Chu
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                Message 2304 - Posted 3 Oct 2006 0:15:44 UTC - in response to Message 2303.

                  Hi, this particular protein test case returns a lot of failed WUs and it could be due to its large protein size. We are looking into the reason now. Thanks for the feedback.

                  I\'m not sure if this is a client or WU problem. But WUID 241813 has now been running for over 24 hours. It has shown as 100% complete for at least the last 14 hours. I\'m aborting it.

                  <Edit>
                  I had to close Boinc to get the Ralph client to end. Boinc showed it had switched to a Seti@home task but task manager showed Ralph 5.27 was still running at 90+% cpu.
                  When I restarted Boinc, it logged the following error...
                  9/30/2006 11:22:59 AM||Data directory: C:\\Program Files\\BOINC
                  9/30/2006 11:22:59 AM|ralph@home|State file error: result DOCK_1EFU_unbound_perturb_benchmark_1315_10_1 is in wrong state
                  9/30/2006 11:22:59 AM||Processor: 1 AuthenticAMD AMD Athlon(tm) XP 2000+

                  </edit>


                  This PC is running Boinc 5.6.4 on Win2K.

                  Message boards : RALPH@home bug list : Bug Report for Ralph 5.27


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