Bug reports for 5.63

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Rhiju
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Message 3048 - Posted: 4 May 2007, 2:38:28 UTC

Please especially report any problems you might notice with checkpointing, or running on powerpc macs.
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Profile Conan
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Message 3052 - Posted: 4 May 2007, 13:26:07 UTC

Same error on 4 work units.
First 3 were 1di2 type WU\'s and the 4th was a 1ogw WU

http://ralph.bakerlab.org/result.php?resultid=502570
http://ralph.bakerlab.org/result.php?resultid=502571
http://ralph.bakerlab.org/result.php?resultid=502688

http://ralph.bakerlab.org/result.php?resultid=502404

stderr out

<core_client_version>5.8.15</core_client_version>
<![CDATA[
<message>
Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
# cpu_run_time_pref: 21600
ERROR:: Unable to determine sequence length from pdb file
# random seed: 2680719
ERROR:: Exit from: .\\pose.cc line: 1929


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ramostol

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Message 3053 - Posted: 4 May 2007, 14:47:13 UTC

I should like to help you, but my Mac merely receives the message \"No work from project\", even after resetting.

-- R. A. Mostol (MacOS 10.3.9)
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Message 3054 - Posted: 4 May 2007, 17:41:50 UTC

Same from me - 3 WU\'s

#503573
#504311
#504230
I wish I can fly like a bird in the sky
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Message 3055 - Posted: 4 May 2007, 18:46:14 UTC

same for me.
#503918
#503462
#503449

Anders n
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Message 3056 - Posted: 4 May 2007, 21:06:15 UTC

Same for me

http://ralph.bakerlab.org/result.php?resultid=505151
http://ralph.bakerlab.org/result.php?resultid=505150

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Rhiju
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Message 3057 - Posted: 4 May 2007, 21:36:29 UTC - in response to Message 3056.  

Thanks to all for posting -- I think we found the source of the error, and
we\'re sending out some more test jobs.

Same for me

http://ralph.bakerlab.org/result.php?resultid=505151
http://ralph.bakerlab.org/result.php?resultid=505150

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Message 3060 - Posted: 4 May 2007, 22:28:42 UTC

OK...

http://ralph.bakerlab.org/result.php?resultid=505320

has error while downloading...

But http://ralph.bakerlab.org/result.php?resultid=505312 seems to be running fine. WU running, gfx working, suspend/restart no error

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Message 3063 - Posted: 5 May 2007, 2:58:00 UTC

Got the same error as Conan on this wu
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Message 3065 - Posted: 5 May 2007, 4:46:34 UTC
Last modified: 5 May 2007, 4:56:57 UTC

Hello, everyone! I seem to have been recruited into my first alpha project (the first that identifies itself as such, at least). I regret that my first posting here has to be negative. Well, mixed …

After getting “No work from project” messages for a few hours after attaching, my G4/400 running BOINC v5.4.9 under Mac OS 10.3.9 received its first WU, 2tif__DIVERSE_ABRELAX__NEWRELAXFLAGS_BCFROMFRAGS20_SAVE_ALL_OUT_frags83__1986_4. It got a “Compute error” in less than twenty seconds:
<message>
process exited with code 1 (0x1)
</message>
<stderr_txt>
Rosetta@home Macintosh Stack Size checker.
  Original size:            0.
  Maximum size:      8388608.
  RLIM_INFINITY            0
# cpu_run_time_pref: 3600
ERROR:: Unable to determine sequence length from pdb file
# random seed: 2680619
ERROR:: Exit from: pose.cc line: 1929
</stderr_txt>

The other two hosts that crunched it, both Windows/AMD, also had errors.

On the brighter side, the next WU I received seems to be doing OK. It began with an estimate of around 25 hours and kicked my host into “panic mode”, but got most of the way through the task in just a couple of hours. Then it seemed to slow down; when I left the shop it was somewhat over 90% done, having found a configuration that vaguely resembled the ‘template’, but still showing about 13 hours to go. When I got home, however, I was encouraged to see that the host had downloaded another WU, indicating that BOINC thinks the current one is almost done.

Awesome graphics, BTW. :)

P.S. Re checkpoints: I forgot to mention that my Mac crashed while running this task (@#$%! Acrobat!) but when I rebooted it resumed very near where it had been when interrupted.
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Message 3066 - Posted: 5 May 2007, 6:03:58 UTC - in response to Message 3065.  

Hi Odyssesus:

Thanks much for the detailed post! The good news is that we\'ve fixed the bug you reported. We\'re glad to hear you can see the graphics, apologize a little for that \"time to complete\" weirdness (it happens on Macs, unforunately) and the occasional lack of work -- welcome to ralph! Soon you\'ll be able to run on rosetta@home (we\'ll probably update the application on Sunday), and there will be plenty of work for your computer to do.

Hello, everyone! I seem to have been recruited into my first alpha project (the first that identifies itself as such, at least). I regret that my first posting here has to be negative. Well, mixed …

After getting “No work from project” messages for a few hours after attaching, my G4/400 running BOINC v5.4.9 under Mac OS 10.3.9 received its first WU, 2tif__DIVERSE_ABRELAX__NEWRELAXFLAGS_BCFROMFRAGS20_SAVE_ALL_OUT_frags83__1986_4. It got a “Compute error” in less than twenty seconds:
<message>
process exited with code 1 (0x1)
</message>
<stderr_txt>
Rosetta@home Macintosh Stack Size checker.
  Original size:            0.
  Maximum size:      8388608.
  RLIM_INFINITY            0
# cpu_run_time_pref: 3600
ERROR:: Unable to determine sequence length from pdb file
# random seed: 2680619
ERROR:: Exit from: pose.cc line: 1929
</stderr_txt>

The other two hosts that crunched it, both Windows/AMD, also had errors.

On the brighter side, the next WU I received seems to be doing OK. It began with an estimate of around 25 hours and kicked my host into “panic mode”, but got most of the way through the task in just a couple of hours. Then it seemed to slow down; when I left the shop it was somewhat over 90% done, having found a configuration that vaguely resembled the ‘template’, but still showing about 13 hours to go. When I got home, however, I was encouraged to see that the host had downloaded another WU, indicating that BOINC thinks the current one is almost done.

Awesome graphics, BTW. :)

P.S. Re checkpoints: I forgot to mention that my Mac crashed while running this task (@#$%! Acrobat!) but when I rebooted it resumed very near where it had been when interrupted.


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Profile Conan
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Message 3068 - Posted: 5 May 2007, 8:50:07 UTC

Error on two WU\'s
http://ralph.bakerlab.org/result.php?resultid=506043
http://ralph.bakerlab.org/result.php?resultid=506044

<core_client_version>5.8.11</core_client_version>
<![CDATA[
<message>
process exited with code 1 (0x1)
</message>
<stderr_txt>
Graphics are disabled due to configuration...
# cpu_run_time_pref: 21600
# random seed: 2679327
Unable to find fullatom number for constraint atom:
Atom Type5Residue type 6 Type CB Fullatom aa 6 Fullatom aav 1
ERROR:: Exit from: constraints.cc line: 464
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Message 3072 - Posted: 5 May 2007, 17:35:26 UTC

I recieved the same error as the above
http://ralph.bakerlab.org/result.php?resultid=506041
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