minirosetta 2.01/2.02

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mtyka
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Message 5005 - Posted: 2 Dec 2009, 23:11:52 UTC
Last modified: 5 Dec 2009, 0:10:36 UTC

Please report bugs here ! Thanks!
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AdeB
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Message 5006 - Posted: 4 Dec 2009, 20:20:52 UTC

Task: 1672358
Name: lr_mix_sc12_run01_rlbd_1acf_SAVE_ALL_OUT_IGNORE_THE_REST_lr10_DECOY_13301_1_0
stderr out:
[color=red]ERROR: res2.connections_to_residue( res1 ).size() == 1
ERROR:: Exit from: src/core/scoring/etable/count_pair/CountPairFactory.cc line: 64
[/color]

AdeB
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Snagletooth

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Message 5007 - Posted: 8 Dec 2009, 18:59:16 UTC

1dnA_2bkf_0210.redesign.pdb.gz_dckCFA.xml__13366_1_0

ERROR: ERROR: Unable to open silent_input file: 'default.out'
ERROR:: Exit from: src/core/io/silent/SilentFileData.cc line: 86
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

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svincent

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Message 5008 - Posted: 10 Dec 2009, 5:48:34 UTC

A couple of failures on Mac OS X 10.6

1681924 lr5_dun08_flat_semirot_A_rlbn_1a8o_SAVE_ALL_OUT_IGNORE_THE_REST_NATIVE_13447_1_0
1681926 lr5_dun08_flat_semirot_A_rlbn_1acf_SAVE_ALL_OUT_IGNORE_THE_REST_NATIVE_13447_1_0

Native pose needed for OptionKeys::relax::constrain_relax_to_native_coords
ERROR:: Exit from: src/protocols/relax/ClassicRelax.cc line: 541
BOINC:: Error reading and gzipping output datafile: default.out
called boinc_finish

</stderr_txt>
]
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Nflight

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Message 5009 - Posted: 10 Dec 2009, 11:06:18 UTC - in response to Message 5005.  

I am not reporting any failures at this time. X86 platform running Windows XP OS, AMD 4200+ machine!
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Profile Erkan Yilmaz

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Message 5010 - Posted: 10 Dec 2009, 19:56:04 UTC

this wu was successful on:

win7 64bit RC, quadcore
6.10.17
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svincent

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Message 5011 - Posted: 10 Dec 2009, 20:11:19 UTC

I'm seeing my results "disappearing" in the sense that BOINC->Projects->Your results is showing fewer of them. Right now I just see one: yesterday evening there were 2 (both failures as reported above) and I know that several others completed successfully yesterday.
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Evan

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Message 5012 - Posted: 10 Dec 2009, 22:15:46 UTC - in response to Message 5011.  

Yes, something is not right. I have sent in over a page load of successful results and can't find them on 'my tasks'. No doubt they are hiding somewhere.
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Profile Conan
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Message 5013 - Posted: 11 Dec 2009, 13:57:42 UTC

As reported by svincent and Evan, all completed results have been purged.
This is not much help to you or us as we can't see the ones that fail and therefore are unable to tell you about it.

I have NO idea if any of my completed work units failed or not as I did not go in yesterday only today and there are none there.
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Profile Saenger
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Message 5014 - Posted: 12 Dec 2009, 10:04:29 UTC - in response to Message 5013.  

As reported by svincent and Evan, all completed results have been purged.
This is not much help to you or us as we can't see the ones that fail and therefore are unable to tell you about it.

Indeed, a Beta project that purges it's WU asap is doing something decidedly wrong. It may be OK for production level, but in beta you have to be able to have a look at your results some time afterwards, and with such an irregular sending projects that "some time" should be in the order of weeks, as was before.

Please adjust the file deleter and the db_purge accordingly, like it was before the last batch.
Gruesse vom Saenger

For questions about Boinc look in the BOINC-Wiki
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