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Message boards : RALPH@home bug list : minirosetta 2.01/2.02

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mtyka
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Joined: Mar 19 08
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Message 5005 - Posted 2 Dec 2009 23:11:52 UTC

    Last modified: 5 Dec 2009 0:10:36 UTC

    Please report bugs here ! Thanks!

    AdeB
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    Joined: Dec 22 07
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    Message 5006 - Posted 4 Dec 2009 20:20:52 UTC

      Task: 1672358
      Name: lr_mix_sc12_run01_rlbd_1acf_SAVE_ALL_OUT_IGNORE_THE_REST_lr10_DECOY_13301_1_0
      stderr out:

      ERROR: res2.connections_to_residue( res1 ).size() == 1
      ERROR:: Exit from: src/core/scoring/etable/count_pair/CountPairFactory.cc line: 64

      AdeB

      Snagletooth

      Joined: May 4 07
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      Message 5007 - Posted 8 Dec 2009 18:59:16 UTC

        1dnA_2bkf_0210.redesign.pdb.gz_dckCFA.xml__13366_1_0

        ERROR: ERROR: Unable to open silent_input file: 'default.out'
        ERROR:: Exit from: src/core/io/silent/SilentFileData.cc line: 86
        BOINC:: Error reading and gzipping output datafile: default.out
        called boinc_finish

        svincent

        Joined: Apr 4 08
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        Message 5008 - Posted 10 Dec 2009 5:48:34 UTC

          A couple of failures on Mac OS X 10.6

          1681924 lr5_dun08_flat_semirot_A_rlbn_1a8o_SAVE_ALL_OUT_IGNORE_THE_REST_NATIVE_13447_1_0
          1681926 lr5_dun08_flat_semirot_A_rlbn_1acf_SAVE_ALL_OUT_IGNORE_THE_REST_NATIVE_13447_1_0

          Native pose needed for OptionKeys::relax::constrain_relax_to_native_coords
          ERROR:: Exit from: src/protocols/relax/ClassicRelax.cc line: 541
          BOINC:: Error reading and gzipping output datafile: default.out
          called boinc_finish

          </stderr_txt>
          ]

          Nflight

          Joined: Nov 1 07
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          Message 5009 - Posted 10 Dec 2009 11:06:18 UTC - in response to Message 5005.

            I am not reporting any failures at this time. X86 platform running Windows XP OS, AMD 4200+ machine!
            ____________

            Profile Erkan Yilmaz

            Joined: Apr 1 09
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            Message 5010 - Posted 10 Dec 2009 19:56:04 UTC

              this wu was successful on:

              win7 64bit RC, quadcore
              6.10.17

              svincent

              Joined: Apr 4 08
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              Message 5011 - Posted 10 Dec 2009 20:11:19 UTC

                I'm seeing my results "disappearing" in the sense that BOINC->Projects->Your results is showing fewer of them. Right now I just see one: yesterday evening there were 2 (both failures as reported above) and I know that several others completed successfully yesterday.

                Evan

                Joined: Dec 23 07
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                Message 5012 - Posted 10 Dec 2009 22:15:46 UTC - in response to Message 5011.

                  Yes, something is not right. I have sent in over a page load of successful results and can't find them on 'my tasks'. No doubt they are hiding somewhere.

                  Profile Conan
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                  Joined: Feb 16 06
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                  Message 5013 - Posted 11 Dec 2009 13:57:42 UTC

                    As reported by svincent and Evan, all completed results have been purged.
                    This is not much help to you or us as we can't see the ones that fail and therefore are unable to tell you about it.

                    I have NO idea if any of my completed work units failed or not as I did not go in yesterday only today and there are none there.
                    ____________

                    Profile Saenger
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                    Joined: Feb 28 06
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                    Message 5014 - Posted 12 Dec 2009 10:04:29 UTC - in response to Message 5013.

                      As reported by svincent and Evan, all completed results have been purged.
                      This is not much help to you or us as we can't see the ones that fail and therefore are unable to tell you about it.

                      Indeed, a Beta project that purges it's WU asap is doing something decidedly wrong. It may be OK for production level, but in beta you have to be able to have a look at your results some time afterwards, and with such an irregular sending projects that "some time" should be in the order of weeks, as was before.

                      Please adjust the file deleter and the db_purge accordingly, like it was before the last batch.
                      ____________
                      Gruesse vom Saenger

                      For questions about Boinc look in the BOINC-Wiki

                      Message boards : RALPH@home bug list : minirosetta 2.01/2.02


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