Bug reports for Ralph 5.09 and 5.10

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Profile Carlos_Pfitzner
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Message 1517 - Posted: 6 May 2006, 15:09:20 UTC

notice the graphics thread on rosetta production v5.07
uses only 10% cpu despite on web interface is set to 20%
and uses *all* available graphics space
and is very fast too , cause not less than 20 frames by second are allowed

*And runs at thread priority 4 too!

*Not switched yet to 640x480 16 bbp -:( I am busy now. Sorry
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Message 1518 - Posted: 6 May 2006, 15:43:05 UTC - in response to Message 1517.  
Last modified: 6 May 2006, 15:45:24 UTC

notice the graphics thread on rosetta production v5.07
uses only 10% cpu despite on web interface is set to 20%
and uses *all* available graphics space
and is very fast too , cause not less than 20 frames by second are allowed

*And runs at thread priority 4 too!

*Not switched yet to 640x480 16 bbp -:( I am busy now. Sorry

Those are MAXIMUM settings. If it does not need the whole amount it will not use it all.
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Message 1519 - Posted: 6 May 2006, 15:52:01 UTC
Last modified: 6 May 2006, 15:52:18 UTC

It's a "hat trick" 3 of 3 of these 5.09 ended in fatal error, on this one puter. I don't have anymore to see if successful completion can occur without the screensaver. Each with the screensaver displayed and an error box asking if I should send the report to MS. WU 90436

Result ID 103382
Name JUMP_ALLBARCODES_1tul__SAVE_ALL_OUT_478_274_0
Workunit 90436
Created 5 May 2006 22:18:38 UTC
Sent 5 May 2006 22:26:28 UTC
Received 6 May 2006 15:57:03 UTC
Server state Over
Outcome Client error
Client state Computing
Exit status -1073741811 (0xffffffffc000000d)
Computer ID 2172
Report deadline 9 May 2006 22:26:28 UTC
CPU time 2748.828125
stderr out <core_client_version>5.4.9</core_client_version>
<message>
- exit code -1073741811 (0xc000000d)
</message>
<stderr_txt>
# cpu_run_time_pref: 14400
# random seed: 3078565

</stderr_txt>


Validate state Invalid
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Message 1520 - Posted: 6 May 2006, 15:58:03 UTC - in response to Message 1519.  

... and an error box asking if I should send the report to MS. WU 90436
...

"MS"!! Well there is your problem right there. Send it to the attention of "Bill". ;>)
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Profile Carlos_Pfitzner
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Message 1521 - Posted: 6 May 2006, 19:01:15 UTC
Last modified: 6 May 2006, 19:32:06 UTC

Those are MAXIMUM settings. If it does not need the whole amount it will not use it all.


YES, I already know what u said - before u have said !

*May be I need of studying english some more. English is not my native Idiom.


What I was trying to show is that ralph graphics
are using 2 times the qty of CPU that rosetta graphics uses.


a suggestion for rosetta/ralph preferences

Use accelerated graphics: (yes/no) default no, for who does not set it.

*may be, then, the cpu usage by graphics, drops to 0.01% to who set yes,
and has adequate software/hardware installed -:)

I hope this time I am rigth understood.

Thanks
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Message 1522 - Posted: 6 May 2006, 21:01:46 UTC

I am now, crunching this WU (5.10) Windows
https://ralph.bakerlab.org/result.php?resultid=104840

Grapics remains with the same problems as I had reported previously for 5.09

However I found time to test other screen resolutions

A) In 640x480 nothing below 1st line of descriptive text is shown

b) After restoring my screen to 1024x768
Grafics does not shown nothing below nn.nnn% Complete !
*seems that ralph graphics has a strong memory -:(

*it remembers the previous screen resolution.
So the problems of not showing the CPU time ... and all others things below -:(

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Message 1523 - Posted: 7 May 2006, 7:20:27 UTC

My first 2 units on 5.10 crashed, though the third is crunching now... Here are the particulars

https://ralph.bakerlab.org/result.php?resultid=105784

stderr out

<core_client_version>5.4.1</core_client_version>
<message>Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
ERROR:: Exit at: .barcode_classes.cc line:500

</stderr_txt>


Crashed at 10 seconds of crunch time. Looking further, another computer crashed with this same WU

https://ralph.bakerlab.org/workunit.php?wuid=92286

The second WU, had the same exact symptoms and error message, though thus far it hasn't yet been assigned to a second computer:

https://ralph.bakerlab.org/result.php?resultid=105748
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Message 1524 - Posted: 7 May 2006, 10:36:01 UTC

this one bombed out with incorrect function here too, others completed fine.
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Message 1525 - Posted: 7 May 2006, 13:18:59 UTC

I am also having problems with these nativebarcode units on 5.10 :

wu 105372
wu 105500
wu 105506

same error as below 0x1 on barcode_classes.cc
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Message 1526 - Posted: 7 May 2006, 16:40:18 UTC

Got 3 more WUs with the same exact error.

stderr out

<core_client_version>5.4.1</core_client_version>
<message>Incorrect function. (0x1) - exit code 1 (0x1)
</message>
<stderr_txt>
ERROR:: Exit at: .barcode_classes.cc line:500

</stderr_txt>


And on these 3 computers, both computers the WUs were given to errored out...

https://ralph.bakerlab.org/result.php?resultid=105778
https://ralph.bakerlab.org/result.php?resultid=105764
https://ralph.bakerlab.org/result.php?resultid=105754
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Message 1528 - Posted: 7 May 2006, 21:36:16 UTC

Got the following on my AMD:
5/7/2006 2:52:05 PM|ralph@home|Unrecoverable error for result JUMP_NATIVEBARCODE_ANTIPARALLEL_1tul__SAVE_ALL_OUT_482_64_2 (Incorrect function. (0x1) - exit code 1 (0x1))

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Message 1529 - Posted: 8 May 2006, 1:09:44 UTC

Same crash after few seconds, using my Intel M 1.7 Notebook
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Message 1532 - Posted: 8 May 2006, 6:03:32 UTC

Exit status 1 (0x1) Raplph (5.10) Windows
https://ralph.bakerlab.org/result.php?resultid=105454
https://ralph.bakerlab.org/result.php?resultid=106231
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Message 1533 - Posted: 8 May 2006, 6:28:06 UTC - in response to Message 1516.  
Last modified: 8 May 2006, 6:28:33 UTC

Quick comments:

(1) I noticed the continuing graphics bug too... I've tried to fix it for 5.11.

(2) I figured out the problem with the NATIVEBARCODE workunits, canceled the old workunits, and sent out some fixed ones! Thanks!

(3) The other error reports are quite useful -- combined with some more debugging code we've implemented, we can hopefully get rid of some of thse problems. Maybe we can cut this error rate from 5-10% to 1-2%!


Thanks for posting, and please post bugs for 5.11 (I just put it up) in the other thread I'm setting up.

The graphics bug hasn't quite been fixed yet (in 5.10). Although only one instance of the descriptive text shows up now, when opening the graphics interface a second (and third, and so on) time, there is an extra blank line between the two lines of text, pushing the rest of the WU info off the screen (model, step, time, percentage, etc), no matter how the window is resized.


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Message 1535 - Posted: 8 May 2006, 8:32:01 UTC

all ralph 5.10:

7/05/2006 4:33:55 PM|ralph@home|Unrecoverable error for result HOMO_7447_h002_1_LOOPRLX_IGNORE_THE_REST7447h002_dec00_2.pdb_474_20_1 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=105313

7/05/2006 5:52:11 PM|ralph@home|Unrecoverable error for result JUMP_NATIVEBARCODE_ANTIPARALLEL_1tul__SAVE_ALL_OUT_481_140_1 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=105853

7/05/2006 5:52:13 PM|ralph@home|Unrecoverable error for result JUMP_NATIVEBARCODE_ANTIPARALLEL_1tul__SAVE_ALL_OUT_481_172_1 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=105888

7/05/2006 5:56:32 PM|ralph@home|Unrecoverable error for result JUMP_NATIVEBARCODE_ANTIPARALLEL_1tul__SAVE_ALL_OUT_481_153_1 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=105869

7/05/2006 5:56:32 PM|ralph@home|Unrecoverable error for result JUMP_NATIVEBARCODE_ANTIPARALLEL_1tul__SAVE_ALL_OUT_481_93_1 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=105878

7/05/2006 6:05:10 PM|ralph@home|Unrecoverable error for result NOCHECK_NO_DOG_7486h002_dec08_1.pdb_417_3_1 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=105863

7/05/2006 7:38:46 PM|ralph@home|Unrecoverable error for result NOCHECK_NO_DOG_7486h002_dec129_1.pdb_417_3_1 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=105866

7/05/2006 7:42:01 PM|ralph@home|Unrecoverable error for result JUMP_NATIVEBARCODE_ANTIPARALLEL_1tul__SAVE_ALL_OUT_482_84_0 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=106120

7/05/2006 7:42:01 PM|ralph@home|Unrecoverable error for result JUMP_NATIVEBARCODE_ANTIPARALLEL_1tul__SAVE_ALL_OUT_482_41_0 (Incorrect function. (0x1) - exit code 1 (0x1))
https://ralph.bakerlab.org/result.php?resultid=106034
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