Message boards : RALPH@home bug list : Rosetta Mini Beta 3.53
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[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 908 Credit: 1,892,541 RAC: 294 |
All wus without problems (up to now) I'm crunching also a wu on my smartphone... |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 908 Credit: 1,892,541 RAC: 294 |
I'm crunching also a wu on my smartphone... Wu at 11% of computation restarts from 0%. This happens 3 times...at the end i kill this wu. This. It's a problem of disk space? Ram? CPU type ARM |
TPCBF Send message Joined: 20 Jun 11 Posts: 30 Credit: 27,776 RAC: 0 |
Yeah, those WUs seem to have a fairly large (low) restart threshold. Got two jobs on my laptop, running for about an hour and when I restarted my laptop today, they both started at 0% again. Theoretically they should finish before I have to leave and hit the road again, hope that they don't start all over again when I get back. Ralf |
TPCBF Send message Joined: 20 Jun 11 Posts: 30 Credit: 27,776 RAC: 0 |
Strange behaviour of the last set of (4) WUs. They are running now for a bit more than 2h, showing around 24% done but only a few odd minutes of elapsed runtime, and only a few (23) seconds of CPU time and supposedly no checkpoint reached yet... :? Running on Windows 8.1/64, with 6GB of RAM and not much else going on on the machine right now... Anyone there and care to explain? Ralf |
sgaboinc Send message Joined: 8 Jul 14 Posts: 20 Credit: 4,159 RAC: 0 |
recent 8 tasks on 3.52 completed without errors. i did a project reset and aborted the next set of tasks (as the 'old' binaries for 3.52 gets downloaded again), note it's not due to any errors. should my client download 3.53 beta rather than 3.52 as it seemed both versions appear in apps? https://ralph.bakerlab.org/apps.php it seemed that the current set of tasks downloads the associated 3.52 binary rather than 3.53 |
TPCBF Send message Joined: 20 Jun 11 Posts: 30 Credit: 27,776 RAC: 0 |
ok, the 4 WUs that I got have by now repeatedly restarted from scratch, even at though at one point showing almost 30% done. And I noticed that those WUs are trashing the hard drive like crazy... Ralf |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 908 Credit: 1,892,541 RAC: 294 |
ok, the 4 WUs that I got have by now repeatedly restarted from scratch, even at though at one point showing almost 30% done. Same here on my notebook, restart and restart and restart.... |
sgaboinc Send message Joined: 8 Jul 14 Posts: 20 Credit: 4,159 RAC: 0 |
ok i found the app files at https://ralph.bakerlab.org/download/ as it turns out on ralph 3.52 and 3.53 beta seemed to be the same files md5 sum app dcb06f5cf47637f6af2759a40c5b0cdb minirosetta_3.52_x86_64-pc-linux-gnu dcb06f5cf47637f6af2759a40c5b0cdb minirosetta_beta_3.53_x86_64-pc-linux-gnu and this same version (supposedly beta) is apparently running in 'production' rosetta@home md5 sum app dcb06f5cf47637f6af2759a40c5b0cdb ../boinc.bakerlab.org_rosetta/minirosetta_3.52_x86_64-pc-linux-gnu would admin like to confirm/clarify this? |
dekim Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 20 Jan 06 Posts: 250 Credit: 543,579 RAC: 0 |
Yes, they are the same version with the exception of the Android app. We are mainly trying to get some data from android platforms to get an idea of success rates etc. |
Dr Who Fan Send message Joined: 2 Sep 06 Posts: 76 Credit: 107,857 RAC: 0 |
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[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 908 Credit: 1,892,541 RAC: 294 |
Yes, they are the same version with the exception of the Android app. We are mainly trying to get some data from android platforms to get an idea of success rates etc. Uh, ok, now i understand why is not optimized very well for android. Hope for future versione... |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
Had this one fail with this error message WU 3128681 ERROR: Fullatom mismatch in checkpointer. ERROR:: Exit from: ......srcprotocolscheckpointCheckPointer.cc line: 379 ERROR: core::pose::symmetry::is_symmetric( native_pose ) || core::pose::symmetry::is_symmetric( pose ) ERROR:: Exit from: ......srccorescoringrms_util.cc line: 1217 std::cerr: Exception was thrown: [ERROR] EXCN_utility_exit has been thrown from: ......srccorescoringrms_util.cc line: 1217 ERROR: core::pose::symmetry::is_symmetric( native_pose ) || core::pose::symmetry::is_symmetric( pose ) Conan |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 908 Credit: 1,892,541 RAC: 294 |
Graphic is black on all relax_2 wus |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 908 Credit: 1,892,541 RAC: 294 |
3303788 Unpacking data: ../../projects/ralph.bakerlab.org/3cx2.1.ralph_test_bbonly.zip Setting database description ... Setting up checkpointing ... Setting up graphics native ... BOINC:: Worker startup. Starting watchdog... Watchdog active. # cpu_run_time_pref: 7200 ERROR: Can't create a polymer bond after residue 31 due to incompatible type: ALA_p:CtermTruncation ERROR:: Exit from: ......srccoreconformationConformation.cc line: 643 std::cerr: Exception was thrown: [ERROR] EXCN_utility_exit has been thrown from: ......srccoreconformationConformation.cc line: 643 ERROR: Can't create a polymer bond after residue 31 due to incompatible type: ALA_p:CtermTruncation |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 908 Credit: 1,892,541 RAC: 294 |
Same here and here |
[VENETO] boboviz Send message Joined: 9 Apr 08 Posts: 908 Credit: 1,892,541 RAC: 294 |
New message on my manager on Windows 8.1 64 bit Rosetta Mini Beta is not available for your type of computer. |
Werinbert Send message Joined: 7 Nov 13 Posts: 2 Credit: 100,810 RAC: 0 |
I am currently running a bunch of WUs already on two windows machines. None the less, I am getting a "Rosetta Mini Beta is not available for your type of computer." message when my computers are looking for new work. Could anyone elaborate? Has there been some sort of change in the last hour or so? |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
Had 3 failed work units on Linux 64 Bit This error on Result 3296207 ERROR: Can't create a polymer bond after residue 9 due to incompatible type: ASP_p:CtermTruncation ERROR:: Exit from: src/core/conformation/Conformation.cc line: 643 std::cerr: Exception was thrown: [ERROR] EXCN_utility_exit has been thrown from: src/core/conformation/Conformation.cc line: 643 ERROR: Can't create a polymer bond after residue 9 due to incompatible type: ASP_p:CtermTruncation This error on Result 3300622 ERROR: Can't create a polymer bond after residue 52 due to incompatible type: VAL_p:CtermTruncation ERROR:: Exit from: src/core/conformation/Conformation.cc line: 643 std::cerr: Exception was thrown: [ERROR] EXCN_utility_exit has been thrown from: src/core/conformation/Conformation.cc line: 643 ERROR: Can't create a polymer bond after residue 52 due to incompatible type: VAL_p:CtermTruncation This error on Result 3304866 ERROR: Can't create a polymer bond after residue 73 due to incompatible type: ALA_p:CtermTruncation ERROR:: Exit from: src/core/conformation/Conformation.cc line: 643 std::cerr: Exception was thrown: [ERROR] EXCN_utility_exit has been thrown from: src/core/conformation/Conformation.cc line: 643 ERROR: Can't create a polymer bond after residue 73 due to incompatible type: ALA_p:CtermTruncation All to do with "relax_xxxx.x_ralph_test_bbonly_" type work units (where xxxx.x changes). Conan |
Conan Send message Joined: 16 Feb 06 Posts: 364 Credit: 1,368,421 RAC: 0 |
New message on my manager on Windows 8.1 64 bit I am also getting this message on my Windows XP 32 Bit computers, and can't get any work. Conan |
dekim Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 20 Jan 06 Posts: 250 Credit: 543,579 RAC: 0 |
I've deprecated the minirosetta_beta app on all platforms except for android to facilitate debugging the android app. |
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Rosetta Mini Beta 3.53
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