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bug report for version 5.80

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Message boards : RALPH@home bug list : bug report for version 5.80

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Ingemar
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Joined: Mar 7 07
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Message 3368 - Posted 12 Sep 2007 19:16:52 UTC

    Please report bugs for version 5.80 here.
    ____________

    Profile anders n

    Joined: Feb 16 06
    Posts: 166
    ID: 91
    Credit: 131,419
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    Message 3370 - Posted 17 Sep 2007 11:02:15 UTC

      Last modified: 17 Sep 2007 11:03:11 UTC

      <error_code>-161</error_code>

      On 3 Wu-s so far.

      This,thisand this.

      Anders n

      ____________

      darkpella

      Joined: Mar 30 06
      Posts: 4
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      Credit: 15,691
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      Message 3371 - Posted 17 Sep 2007 12:23:27 UTC

        Last modified: 17 Sep 2007 12:23:39 UTC

        This WU ended with computattion error, below trascrispt of BOINC logs.

        bye

        darkpella

        17/09/2007 12.44.29|ralph@home|Computation for task v002_1_NMRREF_1_v002_1_id_model_01IGNORE_THE_REST_idl_2309_7_2 finished
        17/09/2007 12.44.29|ralph@home|Output file v002_1_NMRREF_1_v002_1_id_model_01IGNORE_THE_REST_idl_2309_7_2_0 for task v002_1_NMRREF_1_v002_1_id_model_01IGNORE_THE_REST_idl_2309_7_2 absent
        17/09/2007 12.44.30|ralph@home|Deferring communication for 1 min 0 sec
        17/09/2007 12.44.30|ralph@home|Reason: Unrecoverable error for result v002_1_NMRREF_1_v002_1_id_model_01IGNORE_THE_REST_idl_2309_7_2 (<file_xfer_error> <file_name>v002_1_NMRREF_1_v002_1_id_model_01IGNORE_THE_REST_idl_2309_7_2_0</file_name> <error_code>-161</error_code></file_xfer_error>)


        ____________

        Profile anders n

        Joined: Feb 16 06
        Posts: 166
        ID: 91
        Credit: 131,419
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        Message 3372 - Posted 17 Sep 2007 16:24:19 UTC - in response to Message 3370.

          <error_code>-161</error_code>

          On 3 Wu-s so far.

          This,thisand this.

          Anders n


          I had 3 more and all ended with <error_code>-161</error_code>

          Anders n

          ____________

          Profile Conan
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          Posts: 344
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          Credit: 1,325,487
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          Message 3373 - Posted 18 Sep 2007 4:45:02 UTC

            This error

            <core_client_version>5.10.8</core_client_version>
            <![CDATA[
            <stderr_txt>
            Graphics are disabled due to configuration...
            # cpu_run_time_pref: 21600
            # random seed: 1866763
            SIGSEGV: segmentation violation
            Stack trace (20 frames):
            [0x8d7cf2f]
            [0x8d77d1c]
            [0xb7fa7420]
            [0x89a4750]
            [0x804c7f4]
            [0x8a761ed]
            [0x8a76e13]
            [0x8ce6940]
            [0x8bed03a]
            [0x8bef2bf]
            [0x8069806]
            [0x8709f30]
            [0x870eb09]
            [0x8712bff]
            [0x8b25c2e]
            [0x85f6967]
            [0x87320a7]
            [0x8732152]
            [0x8de10f4]
            [0x8048121]

            Exiting...
            Graphics are disabled due to configuration...
            # cpu_run_time_pref: 21600
            ======================================================
            DONE :: 1 starting structures 19256.2 cpu seconds
            This process generated 8 decoys from 8 attempts
            0 starting pdbs were skipped
            ======================================================


            BOINC :: Watchdog shutting down...
            BOINC :: BOINC support services shutting down...

            </stderr_txt>
            <message>
            <file_xfer_error>
            <file_name>v002_1_NMRREF_1_v002_1_id_model_15IGNORE_THE_REST_idl_2309_10_1_0</file_name>
            <error_code>-161</error_code>
            </file_xfer_error>

            On this WU

            ____________

            BigMike
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            Joined: Feb 23 06
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            Message 3375 - Posted 18 Sep 2007 8:28:26 UTC

              I also got that error, but it looks like it either finished or was close to finishing when it happened:

              <core_client_version>5.10.20</core_client_version>
              <![CDATA[
              <stderr_txt>
              # cpu_run_time_pref: 86400
              # random seed: 1866743
              # cpu_run_time_pref: 86400
              ======================================================
              DONE :: 1 starting structures 84473.1 cpu seconds
              This process generated 40 decoys from 40 attempts
              0 starting pdbs were skipped
              ======================================================


              BOINC :: Watchdog shutting down...
              BOINC :: BOINC support services shutting down...

              </stderr_txt>
              <message>
              <file_xfer_error>
              <file_name>v002_1_NMRREF_1_v002_1_id_model_17IGNORE_THE_REST_idl_2309_10_0_0</file_name>
              <error_code>-161</error_code>
              </file_xfer_error>

              </message>
              ]]>

              BigMike
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              Message 3376 - Posted 18 Sep 2007 14:42:38 UTC

                Last modified: 18 Sep 2007 14:50:08 UTC

                This post was deleted by the author because it concerned a version other than 5.80. Sorry about that.

                Billy

                Joined: Jan 29 07
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                Credit: 5,855
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                Message 3378 - Posted 20 Sep 2007 12:19:37 UTC - in response to Message 3368.

                  Please report bugs for version 5.80 here.

                  161 error

                  Mac OSX/Intel

                  zombie67 [MM]
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                  Message 3379 - Posted 20 Sep 2007 15:18:01 UTC

                    Last modified: 20 Sep 2007 15:19:27 UTC

                    I have my run time set to 24 hours (86400 seconds). I have had 3 fail just before completion with -161:

                    http://ralph.bakerlab.org/result.php?resultid=633155 after 84965 sec OSX/Intel
                    http://ralph.bakerlab.org/result.php?resultid=633049 after 84648 sec OSX/Intel
                    http://ralph.bakerlab.org/result.php?resultid=632817 after 84874 sec XP

                    ____________
                    Dublin, CA
                    SETI.USA - Stats - My stuff - BOINC IRC chat

                    Profile [BOINC@Poland]emik

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                    Message 3380 - Posted 20 Sep 2007 17:53:17 UTC


                      <core_client_version>5.10.20</core_client_version>
                      <![CDATA[
                      <stderr_txt>
                      # cpu_run_time_pref: 86400
                      # random seed: 1866827
                      # cpu_run_time_pref: 86400
                      # cpu_run_time_pref: 86400
                      # cpu_run_time_pref: 86400
                      # cpu_run_time_pref: 86400
                      # cpu_run_time_pref: 86400
                      # cpu_run_time_pref: 86400
                      # cpu_run_time_pref: 86400
                      # cpu_run_time_pref: 86400
                      ======================================================
                      DONE :: 1 starting structures 86105.5 cpu seconds
                      This process generated 30 decoys from 30 attempts
                      0 starting pdbs were skipped
                      ======================================================


                      BOINC :: Watchdog shutting down...
                      BOINC :: BOINC support services shutting down...

                      </stderr_txt>
                      <message>
                      <file_xfer_error>
                      <file_name>v002_1_NMRREF_1_v002_1_id_model_09IGNORE_THE_REST_idl_2309_6_0_0</file_name>
                      <error_code>-161</error_code>
                      </file_xfer_error>

                      </message>
                      ]]>


                      WU

                      Profile feet1st

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                      Message 3381 - Posted 20 Sep 2007 20:23:04 UTC

                        Last modified: 20 Sep 2007 20:29:16 UTC

                        Me too. I didn\'t see this one run. 88,519 seconds. 14 decoys. Shouldn\'t it have received credit for the 14 successful decoys? (I personally care zero about credits, but it\'s been an issue brought up on Rosetta by many recently, so I\'m wondering if that is another aspect of this that we should be debugging here on Ralph)

                        <file_name>v002_1_NMRREF_1_v002_1_id_model_02IGNORE_THE_REST_idl_2309_7_2_0</file_name>
                        <error_code>-161</error_code>

                        ____________

                        zombie67 [MM]
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                        Message 3382 - Posted 21 Sep 2007 3:51:12 UTC - in response to Message 3379.

                          I have my run time set to 24 hours (86400 seconds). I have had 3 fail just before completion with -161:

                          http://ralph.bakerlab.org/result.php?resultid=633155 after 84965 sec OSX/Intel
                          http://ralph.bakerlab.org/result.php?resultid=633049 after 84648 sec OSX/Intel
                          http://ralph.bakerlab.org/result.php?resultid=632817 after 84874 sec XP



                          And another:

                          http://ralph.bakerlab.org/result.php?resultid=632964 after 84300 sec.

                          Seems like there is something wrong with the \"let\'s wrap it up\" part of the application.
                          ____________
                          Dublin, CA
                          SETI.USA - Stats - My stuff - BOINC IRC chat

                          Profile Conan
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                          Message 3383 - Posted 22 Sep 2007 12:53:26 UTC

                            This WU got this error

                            /stderr_txt>
                            <message>
                            <file_xfer_error>
                            <file_name>v002_1_NMRREF_1_v002_1_id_model_06IGNORE_THE_REST_idl_2309_5_2_0</file_name>
                            <error_code>-161</error_code>
                            </file_xfer_error>

                            ____________

                            Profile anders n

                            Joined: Feb 16 06
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                            Message 3384 - Posted 23 Sep 2007 6:48:34 UTC - in response to Message 3381.

                              Last modified: 23 Sep 2007 6:50:56 UTC

                              Me too. I didn\'t see this one run. 88,519 seconds. 14 decoys. Shouldn\'t it have received credit for the 14 successful decoys? (I personally care zero about credits, but it\'s been an issue brought up on Rosetta by many recently, so I\'m wondering if that is another aspect of this that we should be debugging here on Ralph)

                              <file_name>v002_1_NMRREF_1_v002_1_id_model_02IGNORE_THE_REST_idl_2309_7_2_0</file_name>
                              <error_code>-161</error_code>


                              This is something we need to discuss more, in my oppinion, so I\'m starting a thread about it in \"Current tests\".

                              Anders n
                              ____________

                              zombie67 [MM]
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                              Message 3388 - Posted 26 Sep 2007 1:49:04 UTC

                                New error (for me anyway):

                                http://ralph.bakerlab.org/result.php?resultid=634671

                                Result ID 634671
                                Name 1wrp__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1wrp_-native__2324_5_1
                                Workunit 562713
                                Created 25 Sep 2007 23:38:29 UTC
                                Sent 25 Sep 2007 23:38:40 UTC
                                Received 26 Sep 2007 0:28:31 UTC
                                Server state Over
                                Outcome Client error
                                Client state Compute error
                                Exit status 193 (0xc1)
                                Computer ID 9589
                                Report deadline 29 Sep 2007 23:38:40 UTC
                                CPU time 15.188766
                                stderr out
                                <core_client_version>5.10.20</core_client_version>
                                <![CDATA[
                                <message>
                                process exited with code 193 (0xc1, -63)
                                </message>
                                <stderr_txt>
                                Rosetta@home Macintosh Stack Size checker.
                                Original size: 8388608.
                                Maximum size: 0.
                                RLIM_INFINITY 67108864
                                # cpu_run_time_pref: 86400
                                # random seed: 1865248
                                SIGBUS: bus error

                                Crashed executable name: rosetta_beta_5.80_i686-apple-darwin
                                built using BOINC library version 5.11.0
                                Machine type Intel 80486
                                System version: Macintosh OS 10.4.10 build 8R2232
                                Tue Sep 25 17:20:53 2007
                                Thread 0:
                                0 /usr/lib/libSystem.B.dylib 0x90037b57 _mach_wait_until + 7
                                1 /usr/lib/libSystem.B.dylib 0x9003799e _nanosleep + 398
                                2 /usr/lib/libSystem.B.dylib 0x900377d9 _sleep + 121
                                3 0x00f7d770
                                4 0x00f6e80e
                                5 0x00f6e8b6
                                6 0x00f6de80
                                7 0x007cb913
                                8 0x000029ee
                                9 0x00002915

                                Thread 1 Crashed:
                                0 0x009506ef
                                1 0x0001fc6a
                                2 0x00a0f744
                                3 0x00a12973
                                4 0x00a186c3
                                5 0x00a6e1ed
                                6 0x00647071
                                7 0x007cb812
                                8 0x00f6e695
                                9 /usr/lib/libSystem.B.dylib 0x90024227 __pthread_body + 84

                                Thread 2:
                                0 /usr/lib/libSystem.B.dylib 0x90037b57 _mach_wait_until + 7
                                1 /usr/lib/libSystem.B.dylib 0x9003799e _nanosleep + 398
                                2 /usr/lib/libSystem.B.dylib 0x900377d9 _sleep + 121
                                3 0x00f70e50
                                4 0x00f65170
                                5 /usr/lib/libSystem.B.dylib 0x90024227 __pthread_body + 84

                                Thread 3:
                                0 /usr/lib/libSystem.B.dylib 0x90037b57 _mach_wait_until + 7
                                1 /usr/lib/libSystem.B.dylib 0x9003799e _nanosleep + 398
                                2 /usr/lib/libSystem.B.dylib 0x900377d9 _sleep + 121
                                3 0x00ed17d6
                                4 /usr/lib/libSystem.B.dylib 0x90024227 __pthread_body + 84

                                Thread 1 crashed with X86 Thread State (32-bit):
                                eax: 0x00000000 ebx: 0x00000000 ecx: 0x00000000 edx: 0x00000000
                                edi: 0x00000000 esi: 0x00000000 ebp: 0xb3ff66c8 esp: 0x00000000
                                ss: 0x00000000 efl: 0x00000000 eip: 0x00f7dba7 cs: 0x00000000
                                ds: 0x00000000 es: 0x00000000 fs: 0x00000000 gs: 0x00000000

                                Binary Images Description:
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                                0x90000000 - 0x90171fff /usr/lib/libSystem.B.dylib
                                0x901c1000 - 0x901c3fff /usr/lib/system/libmathCommon.A.dylib
                                0x901c5000 - 0x90202fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/CoreText.framework/Versions/A/CoreText
                                0x90229000 - 0x902fffff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS
                                0x9031f000 - 0x90774fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/CoreGraphics.framework/Versions/A/CoreGraphics
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                                0x90913000 - 0x90a07fff /usr/lib/libicucore.A.dylib
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                                0x90bd2000 - 0x90bd9fff /usr/lib/libgcc_s.1.dylib
                                0x90bde000 - 0x90c51fff /System/Library/Frameworks/IOKit.framework/Versions/A/IOKit
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                                0x90f67000 - 0x90fcffff /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/OSServices.framework/Versions/A/OSServices
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                                0x91406000 - 0x9140efff /System/Library/Frameworks/DiskArbitration.framework/Versions/A/DiskArbitration
                                0x91415000 - 0x9141cfff /usr/lib/libbsm.dylib
                                0x91420000 - 0x91446fff /System/Library/Frameworks/SystemConfiguration.framework/Versions/A/SystemConfiguration
                                0x91458000 - 0x914cefff /System/Library/Frameworks/CoreAudio.framework/Versions/A/CoreAudio
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                                0x91560000 - 0x91634fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync
                                0x9166f000 - 0x916e2fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/PrintCore.framework/Versions/A/PrintCore
                                0x91710000 - 0x917b9fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/QD.framework/Versions/A/QD
                                0x917df000 - 0x9182afff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices
                                0x91849000 - 0x9185ffff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis
                                0x9186b000 - 0x91886fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/FindByContent.framework/Versions/A/FindByContent
                                0x91891000 - 0x918cefff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LaunchServices.framework/Versions/A/LaunchServices
                                0x918e2000 - 0x918eefff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/SpeechSynthesis.framework/Versions/A/SpeechSynthesis
                                0x918f5000 - 0x91935fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/ImageIO
                                0x91948000 - 0x919fafff /usr/lib/libcrypto.0.9.7.dylib
                                0x91a40000 - 0x91a56fff /usr/lib/libcups.2.dylib
                                0x91a5b000 - 0x91a79fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libJPEG.dylib
                                0x91a7e000 - 0x91addfff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libJP2.dylib
                                0x91aef000 - 0x91af3fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libGIF.dylib
                                0x91af5000 - 0x91b7bfff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libRaw.dylib
                                0x91b7f000 - 0x91bbcfff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libTIFF.dylib
                                0x91bc2000 - 0x91bdcfff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib
                                0x91be1000 - 0x91be3fff /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libRadiance.dylib
                                0x91be5000 - 0x91cc3fff /usr/lib/libxml2.2.dylib
                                0x91ce0000 - 0x91ce0fff /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
                                0x91ce2000 - 0x91d70fff /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage
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                                0x91d79000 - 0x91dd2fff /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvMisc.dylib
                                0x91ddb000 - 0x91dfffff /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib
                                0x91e07000 - 0x92210fff /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
                                0x9224a000 - 0x925fefff /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
                                0x9262b000 - 0x92718fff /usr/lib/libiconv.2.dylib
                                0x9271a000 - 0x92797fff /System/Library/PrivateFrameworks/DesktopServicesPriv.framework/Versions/A/DesktopServicesPriv
                                0x927d8000 - 0x92a08fff /System/Library/Frameworks/Foundation.framework/Versions/C/Foundation
                                0x92b22000 - 0x92b39fff /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
                                0x92b44000 - 0x92b9cfff /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
                                0x92bd1000 - 0x92bd9fff /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SpeechRecognition.framework/Versions/A/SpeechRecognition
                                0x92dc5000 - 0x92dd3fff /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CarbonSound.framework/Versions/A/CarbonSound
                                0x92de4000 - 0x930d9fff /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox
                                0x931df000 - 0x931eafff /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
                                0x9325a000 - 0x9325afff /System/Library/Frameworks/Cocoa.framework/Versions/A/Cocoa
                                0x9325c000 - 0x93912fff /System/Library/Frameworks/AppKit.framework/Versions/C/AppKit
                                0x93c93000 - 0x93d0efff /System/Library/Frameworks/CoreData.framework/Versions/A/CoreData
                                0x93d47000 - 0x93e01fff /System/Library/Frameworks/AudioToolbox.framework/Versions/A/AudioToolbox
                                0x93e44000 - 0x93e44fff /System/Library/Frameworks/AudioUnit.framework/Versions/A/AudioUnit
                                0x93e46000 - 0x94007fff /System/Library/Frameworks/QuartzCore.framework/Versions/A/QuartzCore
                                0x9404d000 - 0x9408efff /usr/lib/libsqlite3.0.dylib
                                0x94096000 - 0x940d0fff /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
                                0x940d5000 - 0x940ebfff /System/Library/Frameworks/CoreVideo.framework/Versions/A/CoreVideo
                                0x96e7e000 - 0x96ec2fff /System/Library/Frameworks/GLUT.framework/Versions/A/GLUT


                                Exiting...

                                </stderr_txt>
                                ]]>
                                Validate state Invalid
                                Claimed credit 0.0634268861788134
                                Granted credit 0
                                application version 5.80

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                                BigMike
                                Avatar

                                Joined: Feb 23 06
                                Posts: 63
                                ID: 738
                                Credit: 58,730
                                RAC: 0
                                Message 3389 - Posted 26 Sep 2007 5:02:00 UTC

                                  Result 635604 blew up almost immediately.

                                  <core_client_version>5.8.16</core_client_version>
                                  <![CDATA[
                                  <message>
                                  Incorrect function. (0x1) - exit code 1 (0x1)
                                  </message>
                                  <stderr_txt>
                                  # cpu_run_time_pref: 86400
                                  # random seed: 1864461
                                  ERROR:: Exit from: .\\pose.cc line: 769

                                  </stderr_txt>
                                  ]]>

                                  --Mike
                                  ____________
                                  Don't believe everything you think.

                                  zombie67 [MM]
                                  Avatar

                                  Joined: Aug 8 06
                                  Posts: 70
                                  ID: 1666
                                  Credit: 1,683,502
                                  RAC: 3,220
                                  Message 3390 - Posted 26 Sep 2007 16:36:44 UTC

                                    Last modified: 26 Sep 2007 16:38:30 UTC

                                    http://ralph.bakerlab.org/result.php?resultid=635534

                                    Failed after 3.8 hours

                                    <core_client_version>5.10.13</core_client_version>
                                    <![CDATA[
                                    <message>
                                    - exit code -1073741819 (0xc0000005)
                                    </message>
                                    <stderr_txt>
                                    # cpu_run_time_pref: 86400
                                    # random seed: 1864531


                                    Unhandled Exception Detected...

                                    - Unhandled Exception Record -
                                    Reason: Access Violation (0xc0000005) at address 0x0091A931 write attempt to address 0x0F5F1000

                                    Engaging BOINC Windows Runtime Debugger...

                                    (more)
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                                    zombie67 [MM]
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                                    Joined: Aug 8 06
                                    Posts: 70
                                    ID: 1666
                                    Credit: 1,683,502
                                    RAC: 3,220
                                    Message 3391 - Posted 26 Sep 2007 16:38:19 UTC

                                      http://ralph.bakerlab.org/result.php?resultid=635840

                                      Failed after 12 seconds

                                      <core_client_version>5.10.10</core_client_version>
                                      <![CDATA[
                                      <message>
                                      process exited with code 1 (0x1, -255)
                                      </message>
                                      <stderr_txt>
                                      Rosetta@home Macintosh Stack Size checker.
                                      Original size: 8388608.
                                      Maximum size: 0.
                                      RLIM_INFINITY 67108864
                                      # cpu_run_time_pref: 86400
                                      # random seed: 1864503
                                      ERROR:: Exit from: pose.cc line: 769

                                      </stderr_txt>
                                      ]]>

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                                      TCU Computer Science

                                      Joined: Feb 16 06
                                      Posts: 5
                                      ID: 330
                                      Credit: 241,166
                                      RAC: 0
                                      Message 3392 - Posted 26 Sep 2007 20:58:23 UTC

                                        Two WUs froze after 17 seconds of CPU time:
                                        1wrp__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1wrp_-native__2331_58
                                        1wrp__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1wrp_-native__2331_68
                                        boincmgr claimed they were running, but CPU was completely idle. I restarted the machine but the same thing happened. I aborted those WUs.


                                        1wrp__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1wrp_-native__2331_84
                                        completed successfully and
                                        1wrp__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1wrp_-native__2331_4
                                        seems to be runnimg normally.

                                        TCU Computer Science

                                        Joined: Feb 16 06
                                        Posts: 5
                                        ID: 330
                                        Credit: 241,166
                                        RAC: 0
                                        Message 3393 - Posted 27 Sep 2007 0:26:45 UTC - in response to Message 3392.

                                          On a different machine, this WU froze (ie, appeared to be running but consumed no CPU time) after 17 seconds of execution
                                          1wrp__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1wrp_-native__2331_83

                                          zombie67 [MM]
                                          Avatar

                                          Joined: Aug 8 06
                                          Posts: 70
                                          ID: 1666
                                          Credit: 1,683,502
                                          RAC: 3,220
                                          Message 3395 - Posted 28 Sep 2007 3:04:52 UTC

                                            http://ralph.bakerlab.org/result.php?resultid=636923

                                            Failed immediately.

                                            <core_client_version>5.10.10</core_client_version>
                                            <![CDATA[
                                            <message>
                                            process exited with code 1 (0x1, -255)
                                            </message>
                                            <stderr_txt>
                                            Rosetta@home Macintosh Stack Size checker.
                                            Original size: 8388608.
                                            Maximum size: 0.
                                            RLIM_INFINITY 67108864
                                            # cpu_run_time_pref: 86400
                                            ERROR:: Exit from: fragments.cc line: 691

                                            </stderr_txt>
                                            ]]>

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                                            AMDave

                                            Joined: Jul 15 06
                                            Posts: 6
                                            ID: 1593
                                            Credit: 100,163
                                            RAC: 0
                                            Message 3396 - Posted 28 Sep 2007 12:37:34 UTC

                                              Last modified: 28 Sep 2007 12:45:04 UTC

                                              ummm. Not the same problem as everyone else, by the look of it.

                                              I have a 5.80 task \"1wrp__BOINC_SYMM_FOLD_AND_DOCK_RELAX-1wrp_-native_2324_91_1\" still running after 38 hours 45 minutes CPU time showing in TaskManager in Win2K on a C2D-6300.

                                              The task in BOINC manager shows as \"waiting to run\" with cpu time 00:00:19.

                                              Unless advised otherwise, if it is still running in 8 hours time I will kill it as the BOINC manager has definitely lost control of it and it may be in a closed loop.

                                              If anyone has any advice to the contrary I would be pleased to consider it.

                                              [EDIT] actually it will be past deadline in 1hr and 30 mins from now so I\'ll kill it in 2 hours [/EDIT]

                                              AMDave
                                              ____________

                                              AMDave

                                              Joined: Jul 15 06
                                              Posts: 6
                                              ID: 1593
                                              Credit: 100,163
                                              RAC: 0
                                              Message 3397 - Posted 28 Sep 2007 16:24:23 UTC

                                                Done.
                                                Task killed at 42 hours real cpu time, 19 seconds boinc cpu time.

                                                Feedback on this wu would be welcome.
                                                ____________

                                                zombie67 [MM]
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                                                Joined: Aug 8 06
                                                Posts: 70
                                                ID: 1666
                                                Credit: 1,683,502
                                                RAC: 3,220
                                                Message 3399 - Posted 1 Oct 2007 14:36:56 UTC

                                                  http://ralph.bakerlab.org/result.php?resultid=638011

                                                  Failed immediately.

                                                  OSX/Intel.

                                                  <core_client_version>5.10.10</core_client_version>
                                                  <![CDATA[
                                                  <message>
                                                  process exited with code 1 (0x1, -255)
                                                  </message>
                                                  <stderr_txt>
                                                  Rosetta@home Macintosh Stack Size checker.
                                                  Original size: 8388608.
                                                  Maximum size: 0.
                                                  RLIM_INFINITY 67108864
                                                  # cpu_run_time_pref: 86400
                                                  ERROR:: Exit from: fragments.cc line: 691

                                                  </stderr_txt>
                                                  ]]>


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                                                  nova_nz_w

                                                  Joined: Oct 2 07
                                                  Posts: 1
                                                  ID: 3609
                                                  Credit: 21,950
                                                  RAC: 0
                                                  Message 3400 - Posted 3 Oct 2007 2:15:48 UTC

                                                    Failed:

                                                    <core_client_version>5.10.20</core_client_version>
                                                    <![CDATA[
                                                    <message>
                                                    Incorrect function. (0x1) - exit code 1 (0x1)
                                                    </message>
                                                    <stderr_txt>
                                                    # cpu_run_time_pref: 3600
                                                    ERROR:: Exit from: .\\fragments.cc line: 691

                                                    </stderr_txt>
                                                    ]]>

                                                    Profile anders n

                                                    Joined: Feb 16 06
                                                    Posts: 166
                                                    ID: 91
                                                    Credit: 131,419
                                                    RAC: 0
                                                    Message 3401 - Posted 3 Oct 2007 18:19:19 UTC

                                                      The \"top7_wo_NatFra\" seem to fail with
                                                      <error_code>-161</error_code>

                                                      Anders n
                                                      ____________

                                                      Keith T.
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                                                      Joined: May 4 07
                                                      Posts: 12
                                                      ID: 3019
                                                      Credit: 10,828
                                                      RAC: 0
                                                      Message 3402 - Posted 3 Oct 2007 21:12:08 UTC - in response to Message 3400.

                                                        Failed:

                                                        <core_client_version>5.10.20</core_client_version>
                                                        <![CDATA[
                                                        <message>
                                                        Incorrect function. (0x1) - exit code 1 (0x1)
                                                        </message>
                                                        <stderr_txt>
                                                        # cpu_run_time_pref: 3600
                                                        ERROR:: Exit from: .\\fragments.cc line: 691

                                                        </stderr_txt>
                                                        ]]>


                                                        I had one of these too:

                                                        http://ralph.bakerlab.org/result.php?resultid=638018

                                                        stderr out <core_client_version>5.10.7</core_client_version>
                                                        <![CDATA[
                                                        <message>
                                                        Incorrect function. (0x1) - exit code 1 (0x1)
                                                        </message>
                                                        <stderr_txt>
                                                        ERROR:: Exit from: .\\options.cc line: 531

                                                        </stderr_txt>
                                                        ]]>
                                                        ____________

                                                        Profile Conan
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                                                        Joined: Feb 16 06
                                                        Posts: 344
                                                        ID: 145
                                                        Credit: 1,325,487
                                                        RAC: 484
                                                        Message 3403 - Posted 5 Oct 2007 13:36:20 UTC

                                                          This Result Errored out with this error

                                                          <core_client_version>5.10.8</core_client_version>
                                                          <![CDATA[
                                                          <message>
                                                          process exited with code 1 (0x1, -255)
                                                          </message>
                                                          <stderr_txt>
                                                          Graphics are disabled due to configuration...
                                                          # cpu_run_time_pref: 21600
                                                          ERROR:: Exit from: fragments.cc line: 691
                                                          ____________

                                                          zombie67 [MM]
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                                                          Joined: Aug 8 06
                                                          Posts: 70
                                                          ID: 1666
                                                          Credit: 1,683,502
                                                          RAC: 3,220
                                                          Message 3404 - Posted 5 Oct 2007 20:32:05 UTC

                                                            http://ralph.bakerlab.org/result.php?resultid=638708

                                                            Failed after 11,160 seconds. Win XP.

                                                            -1073741819 (0xffffffffc0000005)

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                                                            Dr Who Fan
                                                            Avatar

                                                            Joined: Sep 2 06
                                                            Posts: 63
                                                            ID: 1787
                                                            Credit: 56,533
                                                            RAC: 371
                                                            Message 3405 - Posted 6 Oct 2007 10:52:42 UTC

                                                              failed after 6.09375 seconds:

                                                              http://ralph.bakerlab.org/result.php?resultid=639763

                                                              <core_client_version>5.10.20</core_client_version>
                                                              <![CDATA[
                                                              <message>
                                                              Incorrect function. (0x1) - exit code 1 (0x1)
                                                              </message>
                                                              <stderr_txt>
                                                              # cpu_run_time_pref: 7200
                                                              ERROR:: Exit from: .\\fragments.cc line: 769

                                                              </stderr_txt>
                                                              ]]>

                                                              ____________

                                                              zombie67 [MM]
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                                                              Joined: Aug 8 06
                                                              Posts: 70
                                                              ID: 1666
                                                              Credit: 1,683,502
                                                              RAC: 3,220
                                                              Message 3408 - Posted 7 Oct 2007 23:58:39 UTC

                                                                http://ralph.bakerlab.org/result.php?resultid=639741

                                                                Failed after 30985 seconds, win XP.
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                                                                Profile feet1st

                                                                Joined: Mar 7 06
                                                                Posts: 312
                                                                ID: 1028
                                                                Credit: 110,522
                                                                RAC: 0
                                                                Message 3409 - Posted 8 Oct 2007 15:23:33 UTC

                                                                  Last modified: 8 Oct 2007 15:23:51 UTC

                                                                  http://ralph.bakerlab.org/result.php?resultid=638392
                                                                  failed with -161 on Windows.

                                                                  Zero credit awarded 48+hrs after reported. Is the credit granting script working properly? Result shows 43 decoys were reported. My understanding was that such a task should be awarded credit for 43 decoys plus 20 credits for the failure. Is this correct? I ask only because it\'s coming up a lot lately on Rosetta.
                                                                  ____________

                                                                  Dr Who Fan
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                                                                  Joined: Sep 2 06
                                                                  Posts: 63
                                                                  ID: 1787
                                                                  Credit: 56,533
                                                                  RAC: 371
                                                                  Message 3411 - Posted 10 Oct 2007 1:31:14 UTC

                                                                    error report:
                                                                    http://ralph.bakerlab.org/result.php?resultid=639763
                                                                    stderr out

                                                                    <core_client_version>5.10.20</core_client_version>
                                                                    <![CDATA[
                                                                    <message>
                                                                    Incorrect function. (0x1) - exit code 1 (0x1)
                                                                    </message>
                                                                    <stderr_txt>
                                                                    # cpu_run_time_pref: 7200
                                                                    ERROR:: Exit from: .\\fragments.cc line: 769

                                                                    </stderr_txt>
                                                                    ]]>

                                                                    Validate state Invalid
                                                                    ____________

                                                                    Dr Who Fan
                                                                    Avatar

                                                                    Joined: Sep 2 06
                                                                    Posts: 63
                                                                    ID: 1787
                                                                    Credit: 56,533
                                                                    RAC: 371
                                                                    Message 3414 - Posted 12 Oct 2007 1:04:08 UTC

                                                                      error report:
                                                                      http://ralph.bakerlab.org/result.php?resultid=641467
                                                                      stderr out

                                                                      <core_client_version>5.10.20</core_client_version>
                                                                      <![CDATA[
                                                                      <stderr_txt>
                                                                      # cpu_run_time_pref: 7200
                                                                      # random seed: 2152274
                                                                      ==
                                                                      </stderr_txt>
                                                                      ]]>

                                                                      Validate state Invalid
                                                                      ____________

                                                                      zombie67 [MM]
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                                                                      Joined: Aug 8 06
                                                                      Posts: 70
                                                                      ID: 1666
                                                                      Credit: 1,683,502
                                                                      RAC: 3,220
                                                                      Message 3423 - Posted 23 Oct 2007 20:14:46 UTC

                                                                        Three failed in the last day:

                                                                        Compute Error, on XP, <error_code>-161</error_code>:
                                                                        http://ralph.bakerlab.org/result.php?resultid=648581

                                                                        Validate Error, on XP:
                                                                        Too many restarts with no progress. Keep application in memory while preempted.
                                                                        [url]http://ralph.bakerlab.org/result.php?resultid=648521[/url

                                                                        Validate Error, on XP:
                                                                        Too many restarts with no progress. Keep application in memory while preempted.
                                                                        http://ralph.bakerlab.org/result.php?resultid=648458



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                                                                        Message boards : RALPH@home bug list : bug report for version 5.80


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