Message boards : Current tests : Help us debug minirosetta.
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dekim Volunteer moderator Project administrator Project developer Project scientist Send message Joined: 20 Jan 06 Posts: 250 Credit: 543,579 RAC: 0 |
We are looking into the credit granting variation. It might be due to less checkpointing so we'll add more checkpoints in the near future, likely the next update. edit: I'll also look into the optimizations being used. The current app, 1.08, should require less memory, ~90mb depending on the size of the protein being worked on. If people are getting stuck mini jobs, please report them. We may have to add the same watch dog as in the old rosetta app to prevent jobs from being stuck for too long if this is an actual issue. The new pdb symbols file is https://ralph.bakerlab.org/download/minirosetta_1.08_windows_intelx86.pdb it is 27MB! |
alexpoon Send message Joined: 9 Sep 06 Posts: 4 Credit: 87 RAC: 0 |
Does it enable the graphics? |
AdeB Send message Joined: 22 Dec 07 Posts: 61 Credit: 161,367 RAC: 0 |
I'm sometimes getting double of what I'm claiming. Not all linux machines get more credit than claimed. My mobile AMD Athlon(tm) XP2500+ gets less than half of claimed, on Beta tasks it got more. On my AMD Athlon(tm) XP 2000+ there isn't much difference between Mini and Beta tasks |
Evan Send message Joined: 23 Dec 07 Posts: 75 Credit: 69,584 RAC: 0 |
This one became stuck after 50%. However, after closing and restarting boinc it completed successfully. The fault was apparently an Unhandled Exception Detected work unit 779962 |
Billy Send message Joined: 29 Jan 07 Posts: 14 Credit: 7,865 RAC: 0 |
This one got stuck at 64%. I stopped and started Boinc and it completed right away. score13_hb_envtest62_A_1ig5A_3299_4107_0 |
Harrison Neal Send message Joined: 31 Aug 07 Posts: 1 Credit: 19,641 RAC: 0 |
Is it just me or does the new mini-Rosetta (1.08 vs. 1.07) seem to stall at 0% for about 20-30 minutes (while using 100% CPU), and thereafter quickly progress? For reference, this seems to be happening on Xubuntu 7.10 32-bit; processors range from Intel Pentium IIs and AMD K6s to Intel Pentium IVs and AMD Athlon XPs. I'm not sure if this is a bug in the sense; it might just take a while to initialize. It could also be a setting on these computers, which is why I'm asking if anyone else has seen this - I don't believe I ever saw this happen on 1.07, only now with 1.08 (although I could have easily missed seeing this with 1.07). |
Path7 Send message Joined: 11 Feb 08 Posts: 56 Credit: 4,974 RAC: 0 |
Is it just me or does the new mini-Rosetta (1.08 vs. 1.07) seem to stall at 0% for about 20-30 minutes (while using 100% CPU), and thereafter quickly progress? Hello Harrison Neal, Saw the same: mini-Rosetta 1.08 seems to stall (or initializing) at 0 % for about 12 minutes. The 1.07 did the same for about 2 or 5 minutes, on my machine. I'm running Windows XP home on a one core AMD sempron 3000+, 1.8 G Hz. Have a nice day, Path7. |
Evan Send message Joined: 23 Dec 07 Posts: 75 Credit: 69,584 RAC: 0 |
I just had 6 minutes using win xp. Right now it is just guessing in the dark. Perhaps when the graphics come along all will be revealed. |
BigMike Send message Joined: 23 Feb 06 Posts: 63 Credit: 58,730 RAC: 0 |
... we ask that you download our application symbols file on windows platforms so that we can get debugging information. Does this symbols file still apply with Minirosetta 1.08? ==Mike Don't believe everything you think. |
feet1st Send message Joined: 7 Mar 06 Posts: 313 Credit: 116,623 RAC: 0 |
See Message 3762 earlier in this thread, there is a seperate 1.08 symbols file. Note how the name directly matches the application name, except for the file extension. |
BigMike Send message Joined: 23 Feb 06 Posts: 63 Credit: 58,730 RAC: 0 |
Note how the name directly matches the application name, except for the file extension. Thanks. That's why I suspected I was using the wrong one. Sorry I missed the earlier post. ==Mike Don't believe everything you think. |
David Emigh Send message Joined: 6 Jan 08 Posts: 27 Credit: 26,482 RAC: 0 |
I have the .pdb file for 1.08 downloaded to two WinXp crunchers. When the time comes to update to 1.09, what is the procedure? Will a download of the .pdb file for 1.09 overwrite the 1.08 version? I have plenty of disk space, so I don't mind having excess files hanging around, but will the 1.08 symbols interfere with the 1.09 debugging? |
Pepo Send message Joined: 8 Sep 06 Posts: 104 Credit: 36,890 RAC: 0 |
When the time comes to update to 1.09, what is the procedure? When the new pdb symbols file like https://ralph.bakerlab.org/download/minirosetta_1.09_windows_intelx86.pdb will become available, just copy it into your Ralph project folder near the minirosetta_1.08_windows_intelx86.pdb and minirosetta_1.09_windows_intelx86.exe, just as it was said in Message 3695. Will a download of the .pdb file for 1.09 overwrite the 1.08 version? No. You can delete it manually after finshing last 1.08 task. (Maybe, to be on safe side, better after you'll notice, that the 1.08 exe automagically disappeared from your Ralph folder?) I have plenty of disk space, so I don't mind having excess files hanging around, but will the 1.08 symbols interfere with the 1.09 debugging? No, it will not. You can also happily leave it there. Peter |
David Emigh Send message Joined: 6 Jan 08 Posts: 27 Credit: 26,482 RAC: 0 |
Thank you! =) |
BigMike Send message Joined: 23 Feb 06 Posts: 63 Credit: 58,730 RAC: 0 |
When the new pdb symbols file like https://ralph.bakerlab.org/download/minirosetta_1.09_windows_intelx86.pdb will become available... Peter, The 1.09 version is available now...48MB! ==Mike Don't believe everything you think. |
Pepo Send message Joined: 8 Sep 06 Posts: 104 Credit: 36,890 RAC: 0 |
When the new pdb symbols file like https://ralph.bakerlab.org/download/minirosetta_1.09_windows_intelx86.pdb will become available... Thanks, Mike. I've noticed it too, it is already waiting (and compressed to 18MB) two days long in my projects' folders, to be paired with any bugy apps. I've just got the first 3 pieces today (but they finished healthy, again nothing to report about)-; Peter |
fpgamall Send message Joined: 3 Sep 20 Posts: 9 Credit: 0 RAC: 0 |
Thank you for your help, But when my computer uploads, why has the anti-virus software shielded files? t's strange. What's wrong? |
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Help us debug minirosetta.
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